Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735495
Identifier: 187735495
GI number: 187735495
Start: 1190851
End: 1190979
Strand: Reverse
Name: 187735495
Synonym: Amuc_0998
Alternate gene names: NA
Gene position: 1190979-1190851 (Counterclockwise)
Preceding gene: 187735496
Following gene: 187735493
Centisome position: 44.7
GC content: 62.02
Gene sequence:
>129_bases ATGAAGAACATCGCTATCCTCGCCATCGCCGGCGCCGCTTGCCTGGTCGCTTCTTGCTCCCAGCAGCAGCAGCAACAGCA AACCACCGCTCCTGCTCCCGCTCCGGTTGTGCAGGCCAAGGGCAAGTAA
Upstream 100 bases:
>100_bases ATCTCTTGATTTCTACTTGCCACCATTTACATTGGTGCCAGCAAACCTCCGTGGATGCGGAGGTTCCAGTAGTTAACAAA CACTGTATTTAATTCGAATT
Downstream 100 bases:
>100_bases GTTTGCAGCGGGGTTTTGCCCTGCAACACTAGCAAATTATCCAATTAATCCGCACTCGGTGTACGCACTGAGTGCGTTTT TATTTGCCCTGAGTCCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK
Sequences:
>Translated_42_residues MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK >Mature_42_residues MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4235; Mature: 4235
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA