Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735489
Identifier: 187735489
GI number: 187735489
Start: 1184127
End: 1184867
Strand: Direct
Name: 187735489
Synonym: Amuc_0991
Alternate gene names: NA
Gene position: 1184127-1184867 (Clockwise)
Preceding gene: 187735486
Following gene: 187735494
Centisome position: 44.45
GC content: 54.12
Gene sequence:
>741_bases ATGAAGAAAACACTGACATTTTTAATCGCGATGGGAAGCTTTGCTGTTTCCTCGGAGGCAGCGACCGTTTTTAATTATTA CACTCCCGGTACGGATAATTACAATAGTACCATCCATGGGTTTTATCTTGGCCTGGGGTCTTCTTCCCTGGCTCCTTCCG ATTCCTCTTCTCCCTCCTCCCTGTCCGGAGAGATCAGACTGGACAGTTTTACGCTGCGCGGAGCCGCCAACGGTTTGGGC GCTAATGTCACTTACGGCTTCCTGGTGCTGAATGGCTCCGACAATTCGGTCATCGGCTGGAGCACCAATACGGGAACTAC TGCAGCAGGGATTAATCTGACGTTCAGTTTTTCTTCCCTGGATGGTTCTCCCCTGCTTCTTGACGCGGCATTGACATACC GTTTCCTGGCCGTGAGCCAGTCCGTGATGGACTTGATGCAGGATACGTCTAAAACGTATTTATATGCTGCGGGGGGAACA GCCGCCCCTACTGCTAACACGGAAGGAGATACCGTAACGATCAGCGGCGGATTGACTGCTCCCGGCATCCGCGGCCATTA TGACGCCGAGGGAGCGCCTGGTGATTCTGTCGTTATTACGGGAGCCAACGGAACCAATACTTTCAGCTTATTATCCCCGA TTTTCACGGAAATCCGAGGGGAAATGGTGCCGGAACCAGCCACGGTTTCCCTGGGCCTGCTGGGACTGGCCGCGCTGATG ATGCGCCGCCGCAGGGCTTGA
Upstream 100 bases:
>100_bases CATGATTGATTTGGCCTCTTTTTCATTACTTGACGGATTCCAAATCCGATTGGGGAATTCCAAATTCGCTACAAGTTGCC ATCCAAAAGGAATAATAAAT
Downstream 100 bases:
>100_bases GCTTCCTGATGGCGAAAAATCGGCGGATGAGAGCTGTTCTTGCGGAACAGCTCTTGTTTTTTATATCCAGAGAGGAAGAA TTGCTTATCCGTATGCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKKTLTFLIAMGSFAVSSEAATVFNYYTPGTDNYNSTIHGFYLGLGSSSLAPSDSSSPSSLSGEIRLDSFTLRGAANGLG ANVTYGFLVLNGSDNSVIGWSTNTGTTAAGINLTFSFSSLDGSPLLLDAALTYRFLAVSQSVMDLMQDTSKTYLYAAGGT AAPTANTEGDTVTISGGLTAPGIRGHYDAEGAPGDSVVITGANGTNTFSLLSPIFTEIRGEMVPEPATVSLGLLGLAALM MRRRRA
Sequences:
>Translated_246_residues MKKTLTFLIAMGSFAVSSEAATVFNYYTPGTDNYNSTIHGFYLGLGSSSLAPSDSSSPSSLSGEIRLDSFTLRGAANGLG ANVTYGFLVLNGSDNSVIGWSTNTGTTAAGINLTFSFSSLDGSPLLLDAALTYRFLAVSQSVMDLMQDTSKTYLYAAGGT AAPTANTEGDTVTISGGLTAPGIRGHYDAEGAPGDSVVITGANGTNTFSLLSPIFTEIRGEMVPEPATVSLGLLGLAALM MRRRRA >Mature_246_residues MKKTLTFLIAMGSFAVSSEAATVFNYYTPGTDNYNSTIHGFYLGLGSSSLAPSDSSSPSSLSGEIRLDSFTLRGAANGLG ANVTYGFLVLNGSDNSVIGWSTNTGTTAAGINLTFSFSSLDGSPLLLDAALTYRFLAVSQSVMDLMQDTSKTYLYAAGGT AAPTANTEGDTVTISGGLTAPGIRGHYDAEGAPGDSVVITGANGTNTFSLLSPIFTEIRGEMVPEPATVSLGLLGLAALM MRRRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25376; Mature: 25376
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLTFLIAMGSFAVSSEAATVFNYYTPGTDNYNSTIHGFYLGLGSSSLAPSDSSSPSS CCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC LSGEIRLDSFTLRGAANGLGANVTYGFLVLNGSDNSVIGWSTNTGTTAAGINLTFSFSSL CCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEECEEEEEEECCC DGSPLLLDAALTYRFLAVSQSVMDLMQDTSKTYLYAAGGTAAPTANTEGDTVTISGGLTA CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCC PGIRGHYDAEGAPGDSVVITGANGTNTFSLLSPIFTEIRGEMVPEPATVSLGLLGLAALM CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH MRRRRA HHHHCC >Mature Secondary Structure MKKTLTFLIAMGSFAVSSEAATVFNYYTPGTDNYNSTIHGFYLGLGSSSLAPSDSSSPSS CCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC LSGEIRLDSFTLRGAANGLGANVTYGFLVLNGSDNSVIGWSTNTGTTAAGINLTFSFSSL CCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEECEEEEEEECCC DGSPLLLDAALTYRFLAVSQSVMDLMQDTSKTYLYAAGGTAAPTANTEGDTVTISGGLTA CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCC PGIRGHYDAEGAPGDSVVITGANGTNTFSLLSPIFTEIRGEMVPEPATVSLGLLGLAALM CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH MRRRRA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA