Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is coaX
Identifier: 187735475
GI number: 187735475
Start: 1164679
End: 1165407
Strand: Direct
Name: coaX
Synonym: Amuc_0974
Alternate gene names: 187735475
Gene position: 1164679-1165407 (Clockwise)
Preceding gene: 187735474
Following gene: 187735476
Centisome position: 43.72
GC content: 60.91
Gene sequence:
>729_bases GTGACCTATCTTCTGATTGACAATTCCAACACACGCACCAAATTCGTGCTCTCTTCGCCGGAAGCCCTGTTGCCGGAACG GTATATGGTTCCCACCCGGGAGGTGAGCGGGGAACGGCTGGACGAGGTGCTGGCCGGCGTTCGTTATGATGCCGCCGTGG TGTGTTCCGTCGTGCCGCGCGTGGCGGAAGAACTGAAAAACTGGATCGTCAAACCGTGCCATTTCCTTTCCTGCGATTCC CGGCTGGGCGTGGGCATCGACTATCCCCACCCGCGCCAGATAGGGGCCGACAGGCTGGCGAATGCCGTAGGAGCCGCGGC CTATTACGGGTATCCTTGCGTTGTGGTGGACTTTGGCACCGCCGTGACTTTTGACGTGATCGGGCCCCAATGCACCTACA TGGGCGGCGTTATTGCGCCGGGGCTTGCCAGCATGGGGGATTACCTGGAGCGCAATACGGCGCTTCTTCCCGCCATTGAC CCCCAGGAGCCGTCCCGTGTCATTGGAACTAGCACAGTAGAGGCCATGCAATCCGGCGCCGTGTACGGTTATCGGGGGCT GGTGAAGGAAATTCTGGCCCGGCTGGAAGGTGAGCTGGGCGTGCGTCCGGCCGTGGTTGCTACGGGAGGGGATGCAGCTC TGATCGCCAGGGGAGTGGAGCGCATTGACCATGTGGACCCTGACATTACGTTGAACGGCTTGCGCATAGCCGCCGGACTG AATCTTTAA
Upstream 100 bases:
>100_bases GCATGCATGAAAACCTGCTGCGGGCCGGGATGACCGGAGGAAGCGGCAGAATAGCGGATTTGGCCTTGAAACTGGCGGAG GAACATACTAACTGATTCCC
Downstream 100 bases:
>100_bases AGAACGGCCAAAATCGGCTGGAAACCTGCTGCTTCCGGCTCCGTGGCCGGATGACGCATAAAAACTCATAAATAGGTGTT GCAAATGGCGCATACCCCAT
Product: transcriptional acitvator, Baf family
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTYLLIDNSNTRTKFVLSSPEALLPERYMVPTREVSGERLDEVLAGVRYDAAVVCSVVPRVAEELKNWIVKPCHFLSCDS RLGVGIDYPHPRQIGADRLANAVGAAAYYGYPCVVVDFGTAVTFDVIGPQCTYMGGVIAPGLASMGDYLERNTALLPAID PQEPSRVIGTSTVEAMQSGAVYGYRGLVKEILARLEGELGVRPAVVATGGDAALIARGVERIDHVDPDITLNGLRIAAGL NL
Sequences:
>Translated_242_residues MTYLLIDNSNTRTKFVLSSPEALLPERYMVPTREVSGERLDEVLAGVRYDAAVVCSVVPRVAEELKNWIVKPCHFLSCDS RLGVGIDYPHPRQIGADRLANAVGAAAYYGYPCVVVDFGTAVTFDVIGPQCTYMGGVIAPGLASMGDYLERNTALLPAID PQEPSRVIGTSTVEAMQSGAVYGYRGLVKEILARLEGELGVRPAVVATGGDAALIARGVERIDHVDPDITLNGLRIAAGL NL >Mature_241_residues TYLLIDNSNTRTKFVLSSPEALLPERYMVPTREVSGERLDEVLAGVRYDAAVVCSVVPRVAEELKNWIVKPCHFLSCDSR LGVGIDYPHPRQIGADRLANAVGAAAYYGYPCVVVDFGTAVTFDVIGPQCTYMGGVIAPGLASMGDYLERNTALLPAIDP QEPSRVIGTSTVEAMQSGAVYGYRGLVKEILARLEGELGVRPAVVATGGDAALIARGVERIDHVDPDITLNGLRIAAGLN L
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_AKKM8 (B2UQS1)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001877587.1 - ProteinModelPortal: B2UQS1 - SMR: B2UQS1 - GeneID: 6274172 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_0974 - HOGENOM: HBG634537 - OMA: YLERNTA - ProtClustDB: CLSK2337871 - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 25877; Mature: 25746
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: ACT_SITE 97-97 BINDING 88-88 BINDING 120-120 BINDING 172-172
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLLIDNSNTRTKFVLSSPEALLPERYMVPTREVSGERLDEVLAGVRYDAAVVCSVVPR CEEEEEECCCCEEEEEECCCHHHCCCCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHH VAEELKNWIVKPCHFLSCDSRLGVGIDYPHPRQIGADRLANAVGAAAYYGYPCVVVDFGT HHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEECCC AVTFDVIGPQCTYMGGVIAPGLASMGDYLERNTALLPAIDPQEPSRVIGTSTVEAMQSGA EEEEECCCCCHHHCCCHHHCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCC VYGYRGLVKEILARLEGELGVRPAVVATGGDAALIARGVERIDHVDPDITLNGLRIAAGL CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCEEEEECC NL CC >Mature Secondary Structure TYLLIDNSNTRTKFVLSSPEALLPERYMVPTREVSGERLDEVLAGVRYDAAVVCSVVPR EEEEEECCCCEEEEEECCCHHHCCCCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHH VAEELKNWIVKPCHFLSCDSRLGVGIDYPHPRQIGADRLANAVGAAAYYGYPCVVVDFGT HHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEECCC AVTFDVIGPQCTYMGGVIAPGLASMGDYLERNTALLPAIDPQEPSRVIGTSTVEAMQSGA EEEEECCCCCHHHCCCHHHCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCC VYGYRGLVKEILARLEGELGVRPAVVATGGDAALIARGVERIDHVDPDITLNGLRIAAGL CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCEEEEECC NL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA