Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is acpP
Identifier: 187735476
GI number: 187735476
Start: 1165539
End: 1165781
Strand: Direct
Name: acpP
Synonym: Amuc_0975
Alternate gene names: 187735476
Gene position: 1165539-1165781 (Clockwise)
Preceding gene: 187735475
Following gene: 187735477
Centisome position: 43.75
GC content: 46.09
Gene sequence:
>243_bases ATGTCTGACAACAGCATCGAAGAAAAAGTAAGAAGTATCATCGTCGACCAACTTGGCGTTGAATCCGATAAAGTGACTGC TGATGCGAAATTCATCGAGGATCTCGGTGCTGATTCGCTGGATACCGTTGAACTCGTGATGGCTTTCGAAGAAAACTTTG ACATCGAAGTGCCCGACGAAGAAGCCGAAAAGCTTCAGTCTGTTGCCGACGTCGTTGCTTACATCGAAAAGGTTCAGGGT TAA
Upstream 100 bases:
>100_bases CTTCCGGCTCCGTGGCCGGATGACGCATAAAAACTCATAAATAGGTGTTGCAAATGGCGCATACCCCATGTAGTATCAAT GAACCTTAACAATAAATATC
Downstream 100 bases:
>100_bases GTTAAACTGCTAAAAATCCTTTATTACAAAAGCGGCTTCCCTGTCCAAGGCAAGGAAGCCGCTTTTTCATGGAAAGCCTT TCCGCCTTTTCTTCCATGAG
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSDNSIEEKVRSIIVDQLGVESDKVTADAKFIEDLGADSLDTVELVMAFEENFDIEVPDEEAEKLQSVADVVAYIEKVQG
Sequences:
>Translated_80_residues MSDNSIEEKVRSIIVDQLGVESDKVTADAKFIEDLGADSLDTVELVMAFEENFDIEVPDEEAEKLQSVADVVAYIEKVQG >Mature_79_residues SDNSIEEKVRSIIVDQLGVESDKVTADAKFIEDLGADSLDTVELVMAFEENFDIEVPDEEAEKLQSVADVVAYIEKVQG
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
Organism=Escherichia coli, GI1787336, Length=77, Percent_Identity=59.7402597402597, Blast_Score=93, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559764, Length=69, Percent_Identity=43.4782608695652, Blast_Score=61, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6322656, Length=57, Percent_Identity=50.8771929824561, Blast_Score=63, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_AKKM8 (B2UQS2)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001877588.1 - ProteinModelPortal: B2UQS2 - SMR: B2UQS2 - GeneID: 6274170 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_0975 - HOGENOM: HBG755218 - OMA: IDYITEH - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10 - TIGRFAMs: TIGR00517
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 8821; Mature: 8690
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNSIEEKVRSIIVDQLGVESDKVTADAKFIEDLGADSLDTVELVMAFEENFDIEVPDE CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH EAEKLQSVADVVAYIEKVQG HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDNSIEEKVRSIIVDQLGVESDKVTADAKFIEDLGADSLDTVELVMAFEENFDIEVPDE CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH EAEKLQSVADVVAYIEKVQG HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA