Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yvqK [H]
Identifier: 187735414
GI number: 187735414
Start: 1090068
End: 1090625
Strand: Direct
Name: yvqK [H]
Synonym: Amuc_0913
Alternate gene names: 187735414
Gene position: 1090068-1090625 (Clockwise)
Preceding gene: 187735411
Following gene: 187735417
Centisome position: 40.92
GC content: 60.75
Gene sequence:
>558_bases ATGAGCGTAATCACCAAGCGTGGAGACAGCGGAGAAACGGACCTGATGTTCGGCAGGCGTAGTCCCAAGACAGCGCCGCG CATTGAAGCTTACGGAACGGTGGATGAATTAAATTCCCTGATTGGCGTGGTGCGCCATTCCGGGGTAAGCTCCCGGACGG TGGAGATGCTGGACGGCGTCCAGGCTCGCCTGGTGGGTGCCATGGGGGAACTGGCCACGATGGAGGAGGATTTGCCCAAA TATGACGCCAAGGGGTACGCCCGCATTAAGGCGGAGGATGTGGCTTGGCTGGAGGAACAGGCCCATTTGCTGGAAAAGGA ATGCGACATCCGTTTCAAAGGCTGGGCCCGCCCGGGCAAGGAAGGATCGCTGGGATCCGCATATTTGGACCTGGCCCGTT CCGTCTGCCGCCGTGCGGAACGCCGTGTGGTGGCATTGAGGCTGGATCATGCCCTGAGCAACGTGAACACGGCCCTGTTC CTGAACCGCCTTTCCGATCTCTGCTGGGTGCTGGCCCGTTTTGAGGCGCTGGCCGCAGGGGAAAAGATCCAGGCCTGA
Upstream 100 bases:
>100_bases AGAGTGCGGTACATGCCGGGAAAGATGGCGCTGTCTCCCGCTCCGGAATATGCCTTCTTTTTTGCGTGCAGGACGGCGCG GGCATGGTAGGGTACATGGT
Downstream 100 bases:
>100_bases GCAGGCCGTTTCCGCCCGTCCTCCTGTTCCGGCATGTTGCGTATCTGCGCGATTCCCGTGTCGGGAGAATCTCGTGAAAG AATGGTTTTGCCGCAGATCC
Product: ATP/cobalamin adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase [H]
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGVQARLVGAMGELATMEEDLPK YDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGKEGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALF LNRLSDLCWVLARFEALAAGEKIQA
Sequences:
>Translated_185_residues MSVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGVQARLVGAMGELATMEEDLPK YDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGKEGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALF LNRLSDLCWVLARFEALAAGEKIQA >Mature_184_residues SVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGVQARLVGAMGELATMEEDLPKY DAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGKEGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALFL NRLSDLCWVLARFEALAAGEKIQA
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI16418349, Length=191, Percent_Identity=35.0785340314136, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115534154, Length=176, Percent_Identity=34.6590909090909, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - ProDom: PD007457 [H]
Pfam domain/function: PF01923 Cob_adeno_trans [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 20450; Mature: 20318
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGV CCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH QARLVGAMGELATMEEDLPKYDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGK HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCC EGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALFLNRLSDLCWVLARFEALAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKIQA CCCCC >Mature Secondary Structure SVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGV CCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH QARLVGAMGELATMEEDLPKYDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGK HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCC EGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALFLNRLSDLCWVLARFEALAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKIQA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]