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The map label for this gene is yfeR [C]

Identifier: 187735411

GI number: 187735411

Start: 1086910

End: 1087827

Strand: Direct

Name: yfeR [C]

Synonym: Amuc_0910

Alternate gene names: 187735411

Gene position: 1086910-1087827 (Clockwise)

Preceding gene: 187735409

Following gene: 187735414

Centisome position: 40.8

GC content: 58.28

Gene sequence:

>918_bases
ATGTTTGAGCATCTTTTCGCAGAACGGGGACTGTCCCTGGACCGATTGAAAACCTTGATAGAAGTGGCCAAGGCTGGGAG
CATTGCCGCTGCCGCCCGGGGGGATAGTGCGCGGCAGAGCCTGTATTCCCGGCAGATTAAGGAATTGGAGGAATTCTTCG
GTGTGGAACTGGCGAGCCGCCGCGGGAAAGTGCTGGCTCTTACCGGAGCCGGGTGGGAGCTGGTGAGGCTGGCCAGTGAA
AGCCTGTGCCTGCTGGATGATTTTAAAAGCCGGAGCCGGAATCTGCCCTACCGGTTCACTATCGGAGCCGGGGACAGCCT
GCATGCTTGGGTGGTGGCTCCCGTGCTGGCGAGTATCCAGAAACGGGGGCTGCCGTGGCTTTTCGCGCTGGAGAACCTCC
GCAACAGTGAGATTCCCTCTAAGCTCCAGAATATGGATATAGACTTCGGCATTGTGCGTACCAGCGCGCTGGAGGCGGAA
GGGTTGGAAAGCCGGGTCATTTGCTCCATGGATTATGCGCTGTACGTTCCTGCAGCCCTGGCCGGGAAAAAGGCGCGGGG
GAAGAAGGAGGATTTTCTCCGCCTGCTGGAAATGTTCCCCCTGGCAACGCTGGGGAGCGGTTCCGGGTTTCATGCGTTGC
TGAAAAGGAATTGCGCTGAGTTCGGCATCAGGCTGCGGGTGCAGTGTGAAACGCAATCTTTTCCTTTTGCGGCCCGCATG
TTGAAGAGCGGAGCGTTCATGGCAATCCTGCCCTGCATGGCGGAAAAAGAACTGGGGGAAGGATTTGTCAAGGTTACTCA
TCCGGCGCTGGACGGGCTGTCCCGCAGTATTTCCCTGGCCTGGAATCCGCGGTTGCTGCGCGTGAGGCCTTCAGCCAAAC
GGGTAATTGATGTTTTTTCCATCCCGGAACGGGAGTGA

Upstream 100 bases:

>100_bases
GATATGCGGAAAGCGCCTTCGCGCCCTGTGACCTTGTCACCATAACGCATTTGTTGACTCTTGCATTATATAAGTATTCA
TATTATATAACTATAAAGTT

Downstream 100 bases:

>100_bases
TGGAAGGAAAATCAATCAGAATCCACGCCCAATTTATTTTTACGGTAGTGGTCCAGGGAGATGCGGTAAAAATATACGAT
CGCCAGCAAATTCAGCAGGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: LysR Family Transcriptional Regulator

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MFEHLFAERGLSLDRLKTLIEVAKAGSIAAAARGDSARQSLYSRQIKELEEFFGVELASRRGKVLALTGAGWELVRLASE
SLCLLDDFKSRSRNLPYRFTIGAGDSLHAWVVAPVLASIQKRGLPWLFALENLRNSEIPSKLQNMDIDFGIVRTSALEAE
GLESRVICSMDYALYVPAALAGKKARGKKEDFLRLLEMFPLATLGSGSGFHALLKRNCAEFGIRLRVQCETQSFPFAARM
LKSGAFMAILPCMAEKELGEGFVKVTHPALDGLSRSISLAWNPRLLRVRPSAKRVIDVFSIPERE

Sequences:

>Translated_305_residues
MFEHLFAERGLSLDRLKTLIEVAKAGSIAAAARGDSARQSLYSRQIKELEEFFGVELASRRGKVLALTGAGWELVRLASE
SLCLLDDFKSRSRNLPYRFTIGAGDSLHAWVVAPVLASIQKRGLPWLFALENLRNSEIPSKLQNMDIDFGIVRTSALEAE
GLESRVICSMDYALYVPAALAGKKARGKKEDFLRLLEMFPLATLGSGSGFHALLKRNCAEFGIRLRVQCETQSFPFAARM
LKSGAFMAILPCMAEKELGEGFVKVTHPALDGLSRSISLAWNPRLLRVRPSAKRVIDVFSIPERE
>Mature_305_residues
MFEHLFAERGLSLDRLKTLIEVAKAGSIAAAARGDSARQSLYSRQIKELEEFFGVELASRRGKVLALTGAGWELVRLASE
SLCLLDDFKSRSRNLPYRFTIGAGDSLHAWVVAPVLASIQKRGLPWLFALENLRNSEIPSKLQNMDIDFGIVRTSALEAE
GLESRVICSMDYALYVPAALAGKKARGKKEDFLRLLEMFPLATLGSGSGFHALLKRNCAEFGIRLRVQCETQSFPFAARM
LKSGAFMAILPCMAEKELGEGFVKVTHPALDGLSRSISLAWNPRLLRVRPSAKRVIDVFSIPERE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33774; Mature: 33774

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEHLFAERGLSLDRLKTLIEVAKAGSIAAAARGDSARQSLYSRQIKELEEFFGVELASR
CCHHHHHHCCCCHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHCCHHHCC
RGKVLALTGAGWELVRLASESLCLLDDFKSRSRNLPYRFTIGAGDSLHAWVVAPVLASIQ
CCCEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
KRGLPWLFALENLRNSEIPSKLQNMDIDFGIVRTSALEAEGLESRVICSMDYALYVPAAL
HCCCCCEEHHHHCCCCCCHHHHHHCCCCEEEEEHHHHCCCCCCCEEEEEECHHHHHHHHH
AGKKARGKKEDFLRLLEMFPLATLGSGSGFHALLKRNCAEFGIRLRVQCETQSFPFAARM
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
LKSGAFMAILPCMAEKELGEGFVKVTHPALDGLSRSISLAWNPRLLRVRPSAKRVIDVFS
HHCCCHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHC
IPERE
CCCCC
>Mature Secondary Structure
MFEHLFAERGLSLDRLKTLIEVAKAGSIAAAARGDSARQSLYSRQIKELEEFFGVELASR
CCHHHHHHCCCCHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHCCHHHCC
RGKVLALTGAGWELVRLASESLCLLDDFKSRSRNLPYRFTIGAGDSLHAWVVAPVLASIQ
CCCEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
KRGLPWLFALENLRNSEIPSKLQNMDIDFGIVRTSALEAEGLESRVICSMDYALYVPAAL
HCCCCCEEHHHHCCCCCCHHHHHHCCCCEEEEEHHHHCCCCCCCEEEEEECHHHHHHHHH
AGKKARGKKEDFLRLLEMFPLATLGSGSGFHALLKRNCAEFGIRLRVQCETQSFPFAARM
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
LKSGAFMAILPCMAEKELGEGFVKVTHPALDGLSRSISLAWNPRLLRVRPSAKRVIDVFS
HHCCCHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHC
IPERE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA