Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yugP [H]
Identifier: 187735396
GI number: 187735396
Start: 1066958
End: 1067716
Strand: Reverse
Name: yugP [H]
Synonym: Amuc_0894
Alternate gene names: 187735396
Gene position: 1067716-1066958 (Counterclockwise)
Preceding gene: 187735397
Following gene: 187735390
Centisome position: 40.08
GC content: 57.58
Gene sequence:
>759_bases ATGATTGAGTTATTCAATATCGATCTCCTTTCTTATACGGTACAGACGGCGGAAACCGCCCCAACGCATTCCTATACCAT TTACTGGTTGATTCTGCTGGGCTCCATGCTTCTGAGCTGGCTGGTCAGTGCGCGCATGAAGAGCCGCTTCAGCGAATACT CCCAGATTTCCATTCCCGTAACAGGGAGGCAGGTGGCGGAGCAGATGCTGAAGGACAACCATATTACGGACGTGAAGGTG ATTTCCACGCCCGGCCATCTGACGGACCATTACAATCCGGCGGACAAAACCGTCAACCTGAGCGAGTCCGTTTACAATTC CAACAGCATTGCCGCCGCTGCCGTCGCCGCCCATGAAGTAGGGCATGCCGTGCAGCACGCCCAGGCTTATCACTGGCTGG GCTTGCGGTCCGCGCTGGTTCCCATCGTCCAGCTCTCCTCCAACCTGGTGGGCATTGTGCTGATGATCGGCATTGTGCTG CTGGCCATGGGCGGCTCTCCGTGGGTGCTGGGGCTGGGCATCGGCCTGTTTGCCGTGACCACAGCCTTCGCGTTCATCAC GCTTCCCGTGGAATTTGACGCCTCCGCCAGGGCCCTGAAATGGCTGGACCGCTCCCACCTGATGAACTATTTCGACCATG GAAAGGCCAAGAGCGCCCTGTTCTGGGCCGCCATGACTTACGTGGTAGGAGCGCTTTCCTCCCTGGCCATGCTGCTGTAT TACGTGTTCATTTTCCTGAACGCCCGCGGCAGGGAATAA
Upstream 100 bases:
>100_bases CGCACATTTCCGTATGACAGAAGCCGGGGGACTCCCTCCGGAGGCTGACACGGCACCCTCTGGATTCAACAAAGCCTGAT GATATAAGGTCAAATTTGCA
Downstream 100 bases:
>100_bases TCCCGCGCCGTACGGAGGAGGAAACATCCCCGGGACGCTCAATCCGGAACTGTCCGGGCCGCCTGGCCCTCACCTCCGCT TGAGCGCATGCGCCGCGCCG
Product: peptidase membrane zinc metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MIELFNIDLLSYTVQTAETAPTHSYTIYWLILLGSMLLSWLVSARMKSRFSEYSQISIPVTGRQVAEQMLKDNHITDVKV ISTPGHLTDHYNPADKTVNLSESVYNSNSIAAAAVAAHEVGHAVQHAQAYHWLGLRSALVPIVQLSSNLVGIVLMIGIVL LAMGGSPWVLGLGIGLFAVTTAFAFITLPVEFDASARALKWLDRSHLMNYFDHGKAKSALFWAAMTYVVGALSSLAMLLY YVFIFLNARGRE
Sequences:
>Translated_252_residues MIELFNIDLLSYTVQTAETAPTHSYTIYWLILLGSMLLSWLVSARMKSRFSEYSQISIPVTGRQVAEQMLKDNHITDVKV ISTPGHLTDHYNPADKTVNLSESVYNSNSIAAAAVAAHEVGHAVQHAQAYHWLGLRSALVPIVQLSSNLVGIVLMIGIVL LAMGGSPWVLGLGIGLFAVTTAFAFITLPVEFDASARALKWLDRSHLMNYFDHGKAKSALFWAAMTYVVGALSSLAMLLY YVFIFLNARGRE >Mature_252_residues MIELFNIDLLSYTVQTAETAPTHSYTIYWLILLGSMLLSWLVSARMKSRFSEYSQISIPVTGRQVAEQMLKDNHITDVKV ISTPGHLTDHYNPADKTVNLSESVYNSNSIAAAAVAAHEVGHAVQHAQAYHWLGLRSALVPIVQLSSNLVGIVLMIGIVL LAMGGSPWVLGLGIGLFAVTTAFAFITLPVEFDASARALKWLDRSHLMNYFDHGKAKSALFWAAMTYVVGALSSLAMLLY YVFIFLNARGRE
Specific function: Unknown
COG id: COG2738
COG function: function code R; Predicted Zn-dependent protease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007395 [H]
Pfam domain/function: PF04298 Zn_peptidase_2 [H]
EC number: NA
Molecular weight: Translated: 27720; Mature: 27720
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELFNIDLLSYTVQTAETAPTHSYTIYWLILLGSMLLSWLVSARMKSRFSEYSQISIPV CEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC TGRQVAEQMLKDNHITDVKVISTPGHLTDHYNPADKTVNLSESVYNSNSIAAAAVAAHEV CHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHH GHAVQHAQAYHWLGLRSALVPIVQLSSNLVGIVLMIGIVLLAMGGSPWVLGLGIGLFAVT HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TAFAFITLPVEFDASARALKWLDRSHLMNYFDHGKAKSALFWAAMTYVVGALSSLAMLLY HHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YVFIFLNARGRE HHHHHHCCCCCC >Mature Secondary Structure MIELFNIDLLSYTVQTAETAPTHSYTIYWLILLGSMLLSWLVSARMKSRFSEYSQISIPV CEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC TGRQVAEQMLKDNHITDVKVISTPGHLTDHYNPADKTVNLSESVYNSNSIAAAAVAAHEV CHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHH GHAVQHAQAYHWLGLRSALVPIVQLSSNLVGIVLMIGIVLLAMGGSPWVLGLGIGLFAVT HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TAFAFITLPVEFDASARALKWLDRSHLMNYFDHGKAKSALFWAAMTYVVGALSSLAMLLY HHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YVFIFLNARGRE HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]