Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735393

Identifier: 187735393

GI number: 187735393

Start: 1063171

End: 1063773

Strand: Direct

Name: 187735393

Synonym: Amuc_0891

Alternate gene names: NA

Gene position: 1063171-1063773 (Clockwise)

Preceding gene: 187735392

Following gene: 187735394

Centisome position: 39.91

GC content: 53.57

Gene sequence:

>603_bases
ATGAGACTTACTCTTCCATGGCCGTTGCGCCGTTTTCTGCTGGGGGCTCTTCTGTGTTCCGTAACGATGGCGACCGCCGC
TTCCGGGGCGGAATTCGTGGTGGACGCCGCGCAGGCAACCGACCCGTCCGGGAACGTGTACCGCACGCTTCAGGAATTGT
CCTCTTCCGGGGCGCTGTCTTCCGGGGATACCGTTATTTTGTGCAATGATGATTCTTCTCTGACTTCAGCTCTGAATGTA
GCTGTCCATTTCCGTTCCAATGATCCGGCGCTGTTCCGCACCATCAGCAGCTCCCCCGACATTTGGGTAGACTATTTGTA
CAACTTTCAAGGAATGCCCCTCCGGCCCGGCAGCCAGACACGCCCCGATATATCGGGAGTTCTTGATGAAAATGGAGTTG
CCGTTTTGACGATGGATTCCATCATTCTGAACGGAATGGCGTTAACAACGACGCATACTTCTTCCTGTATAAAAATAACG
GGCAACGTCCAGTTTGAAAATTCCCTAGGAGTTCCTGCCATCAGATCCGGGAAATACAGCCCGGACGGAACCGTCTCGAT
GACGTTGGAAGGCCGCTTTGTGGTCATGCTCTCCGTATTTTAG

Upstream 100 bases:

>100_bases
TATTTTCTAAAACTTTCTCTGTCAAAACGCCATTTAAACAGCGGATTCGAAATCCGTTATTTAGCGGCCTTCCCAATATT
AACGATTCTTATTAAAAGAT

Downstream 100 bases:

>100_bases
AAAAATCAAACGTGGTGATAGGAGATAACGCCCTGTTCCGGGGAAATTGGCACGGCGCTATTCCTATCGAGCAGAATTAT
AACGGAGGTGCGATTTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALSSGDTVILCNDDSSLTSALNV
AVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQTRPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKIT
GNVQFENSLGVPAIRSGKYSPDGTVSMTLEGRFVVMLSVF

Sequences:

>Translated_200_residues
MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALSSGDTVILCNDDSSLTSALNV
AVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQTRPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKIT
GNVQFENSLGVPAIRSGKYSPDGTVSMTLEGRFVVMLSVF
>Mature_200_residues
MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALSSGDTVILCNDDSSLTSALNV
AVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQTRPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKIT
GNVQFENSLGVPAIRSGKYSPDGTVSMTLEGRFVVMLSVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21331; Mature: 21331

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALS
CEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
SGDTVILCNDDSSLTSALNVAVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQT
CCCEEEEECCCCHHHEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC
RPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKITGNVQFENSLGVPAIRSGKYS
CCCCCEEECCCCEEEEEECHHHHCCEEEEEECCCCEEEEEEEEEECCCCCCCEECCCCCC
PDGTVSMTLEGRFVVMLSVF
CCCEEEEEECCEEEEEEEEC
>Mature Secondary Structure
MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALS
CEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
SGDTVILCNDDSSLTSALNVAVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQT
CCCEEEEECCCCHHHEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC
RPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKITGNVQFENSLGVPAIRSGKYS
CCCCCEEECCCCEEEEEECHHHHCCEEEEEECCCCEEEEEEEEEECCCCCCCEECCCCCC
PDGTVSMTLEGRFVVMLSVF
CCCEEEEEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA