Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735393
Identifier: 187735393
GI number: 187735393
Start: 1063171
End: 1063773
Strand: Direct
Name: 187735393
Synonym: Amuc_0891
Alternate gene names: NA
Gene position: 1063171-1063773 (Clockwise)
Preceding gene: 187735392
Following gene: 187735394
Centisome position: 39.91
GC content: 53.57
Gene sequence:
>603_bases ATGAGACTTACTCTTCCATGGCCGTTGCGCCGTTTTCTGCTGGGGGCTCTTCTGTGTTCCGTAACGATGGCGACCGCCGC TTCCGGGGCGGAATTCGTGGTGGACGCCGCGCAGGCAACCGACCCGTCCGGGAACGTGTACCGCACGCTTCAGGAATTGT CCTCTTCCGGGGCGCTGTCTTCCGGGGATACCGTTATTTTGTGCAATGATGATTCTTCTCTGACTTCAGCTCTGAATGTA GCTGTCCATTTCCGTTCCAATGATCCGGCGCTGTTCCGCACCATCAGCAGCTCCCCCGACATTTGGGTAGACTATTTGTA CAACTTTCAAGGAATGCCCCTCCGGCCCGGCAGCCAGACACGCCCCGATATATCGGGAGTTCTTGATGAAAATGGAGTTG CCGTTTTGACGATGGATTCCATCATTCTGAACGGAATGGCGTTAACAACGACGCATACTTCTTCCTGTATAAAAATAACG GGCAACGTCCAGTTTGAAAATTCCCTAGGAGTTCCTGCCATCAGATCCGGGAAATACAGCCCGGACGGAACCGTCTCGAT GACGTTGGAAGGCCGCTTTGTGGTCATGCTCTCCGTATTTTAG
Upstream 100 bases:
>100_bases TATTTTCTAAAACTTTCTCTGTCAAAACGCCATTTAAACAGCGGATTCGAAATCCGTTATTTAGCGGCCTTCCCAATATT AACGATTCTTATTAAAAGAT
Downstream 100 bases:
>100_bases AAAAATCAAACGTGGTGATAGGAGATAACGCCCTGTTCCGGGGAAATTGGCACGGCGCTATTCCTATCGAGCAGAATTAT AACGGAGGTGCGATTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALSSGDTVILCNDDSSLTSALNV AVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQTRPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKIT GNVQFENSLGVPAIRSGKYSPDGTVSMTLEGRFVVMLSVF
Sequences:
>Translated_200_residues MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALSSGDTVILCNDDSSLTSALNV AVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQTRPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKIT GNVQFENSLGVPAIRSGKYSPDGTVSMTLEGRFVVMLSVF >Mature_200_residues MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALSSGDTVILCNDDSSLTSALNV AVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQTRPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKIT GNVQFENSLGVPAIRSGKYSPDGTVSMTLEGRFVVMLSVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21331; Mature: 21331
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALS CEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC SGDTVILCNDDSSLTSALNVAVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQT CCCEEEEECCCCHHHEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC RPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKITGNVQFENSLGVPAIRSGKYS CCCCCEEECCCCEEEEEECHHHHCCEEEEEECCCCEEEEEEEEEECCCCCCCEECCCCCC PDGTVSMTLEGRFVVMLSVF CCCEEEEEECCEEEEEEEEC >Mature Secondary Structure MRLTLPWPLRRFLLGALLCSVTMATAASGAEFVVDAAQATDPSGNVYRTLQELSSSGALS CEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC SGDTVILCNDDSSLTSALNVAVHFRSNDPALFRTISSSPDIWVDYLYNFQGMPLRPGSQT CCCEEEEECCCCHHHEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC RPDISGVLDENGVAVLTMDSIILNGMALTTTHTSSCIKITGNVQFENSLGVPAIRSGKYS CCCCCEEECCCCEEEEEECHHHHCCEEEEEECCCCEEEEEEEEEECCCCCCCEECCCCCC PDGTVSMTLEGRFVVMLSVF CCCEEEEEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA