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The map label for this gene is pmp10 [H]

Identifier: 187735394

GI number: 187735394

Start: 1063785

End: 1066232

Strand: Direct

Name: pmp10 [H]

Synonym: Amuc_0892

Alternate gene names: 187735394

Gene position: 1063785-1066232 (Clockwise)

Preceding gene: 187735393

Following gene: 187735395

Centisome position: 39.93

GC content: 61.72

Gene sequence:

>2448_bases
GTGGTGATAGGAGATAACGCCCTGTTCCGGGGAAATTGGCACGGCGCTATTCCTATCGAGCAGAATTATAACGGAGGTGC
GATTTGGAGTAGGGGGGGAAATATCATCATAGGAAATCATGCGGAATTCGACGGGAATTATGTTTTCTCTGATAGGCAGG
CTTGCCAAGGTGGAGTATTTTATGATGACTTTTTTGGCGGTGCGATAACTGTAGGAGCGGATGCCGTTTTTACCGGTAAC
TTTGTTTTCAGTACCAACTACTCTGCTGCTGGGGGCGCGATGTTTGTCAGAAAGGATGGACAGAAATATGCGGCAGAAAC
AGGGGCAATAACCATAGGACCCAACCCCAGTTTCATCAAAAATTTTGCTTACTCCGGAAGTGCTGATGCTTATGGCGGTG
TGATTTACAGCGATGGGGATATTTCTTTCAGCGATGGAGCTACGTTTATCAACAATTATGCCAAGACTTCCGGGGGAGCC
ATCACGATGGGAGGGAAATGCGACCTGCTCGCTCTGACGAAGGACGTGCTTTTCAGCGGCAACATGGCTGGGGGCGTCGT
CATCGGCCAGTCCGACGATGGCTTCCCCGTGGTGGAAAACGGCATTGCGAATGCCATTGACATGAACGGTTCTTTGTTTT
CTTCACTTTATACGCCCAATCTGACGCTTGCCGCGGAAGAGAGGCGTGAAATCCGTTTCAACGACCCGATTACCAGCCGG
AACGAAGACCCCGGCCGCCCTATGACCCTCACGCTCAACCGCTACACGGACGGGGAGGGGAATGTTCGCGACACGGATGG
AACGATCGTCTTCAGCGGCGAACTCTACCAGGGAGAAGATACGCATCTTGCCGCCAGCCGGTACAACAGCTTCCTCGCGG
ATGCCACCCTCTATGGCGGCGCCCTCCTGCTGGAACACGATGTTGTCTTCGGCAGGAATCCTGAGGAAATAACGGATAAA
CGATACAACTCCTCCCTGACGGTGGAAAAAGGCGTGCTGGAAATCACCGGAGGAAGCAAGGCCAACGCCTCCAGCTTCAC
CCTCTCCGGCCCTGGCGCCGTCCTGCGCCCCGGGGAGAGCGCCTTCATCAACACCCACAACGCCGACCTTTCCCACGGCT
TCACCTTCGATATGCGCCACCAGCTCCAGGCCGGGCCGGTCTTCGGCCCGGGCCTGATGCTCTCCGCCCTGGACTCCTTT
ACGGCCGGGGGGTACATCGGCGTGGCGGACACGGGAGCCAACGCCCCCCGGTTCTACGCGGACCGCTCCTGGAAGCAGGA
CCGCGTCTTCCACGTGCTGACGGATGTGCAGCACATCCATGAGGGGGACTTTGACGGGGCCGTCTCCCAGGCCACCGGAA
CGGCCCGGGTGGATGACCCCTACGCCTACACGGGAACCTGGAGCCACCGGTGGACGGACGCGGACGGCGACGGCTACGCC
GAACAGCTCCAGCTGGTCTGGAAAGCGGACGGAACCCCCATCAGCCGCGTTGACCCGGAACTGGCCGGGGAACTGGCCGT
CAACTCCCTCTGGAGCTCGGCGTCCAACGCGGCGGCCTTGGGCGGCAACGTCCTCTCCCGTCTGAGCGTGCCGCGCCTGG
CCGACAGGCATGCCCGCAACCTGTGGGGCATGGGGCTGGGCGACTTCGCCCGGCAGCGCAGCCGGGGAGGCGTGGACGGC
TACGACTACAACGGAGGCGGCTACTCCGTGGGGGCGGACAGCGGCATGGGAGGGGAGGACGAGGGCATCTGGGGGATCGC
CTTCGGGCAGCTCTGCGGCCATGCCAGAAGCCGGGACTTCCAGGGGCGCAACACGCAGGACACCCGGATGGGCTCCCTGT
ACTGGGGCCGCCTGATGGAAGAAAGCAACAGGGCGTACTGGATCTTCAAGGGAAGCCTCACGTGGGCGGAAACGCGCAAC
AACATGACCAGCCGCCTGAGCGGGGCGCCGGCCTCCAGGGGCAAATGGAACAACGAGACGTGGCTGGCGCAGGCGGAAGT
GTCCCGGACGGCGGACTGTGCGGGAGGGTGGAGGCTGACGCCGTTCGTGAGGATGGAATTCACGCACGGCCGTCAGGACG
CCTTCCGGGAACAGGGAGGGTATGGCCGTGACTTCGGAGGGGCGGCGCTGAAACGCCTGTCCATTCCCGTGGGCCTGGAA
ATAGGCAGGACGGACGAATGGAAGGGGAGGCCGTGGGCGCAGTCGCTGCGCGTGTCCTATGTGGGGGACGTGCTGAGGGA
CGTGCCGGAAGCGGCGGTGTACAGCCCGTACAGCGACATGGGCTGGAGAGGAAGGGCGGTGAGCCCGGAACGGCACGGCC
TGCGCGCGGAGTACAACACGTTCCTGCAGTGCAATGAGCGCTGGAGCGTGTACGGGGGCTACGGGCTGGAAGTGAGGGGA
AGCTCCTGCTACCACCGCGTGAACGCAGGGGTGTCCAGGAGCTTCTAA

Upstream 100 bases:

>100_bases
CTGCCATCAGATCCGGGAAATACAGCCCGGACGGAACCGTCTCGATGACGTTGGAAGGCCGCTTTGTGGTCATGCTCTCC
GTATTTTAGAAAAATCAAAC

Downstream 100 bases:

>100_bases
AAGAAAGCTTCAGGAAACGGAATGAAAAATAATGATATGATTATTCTATGAATCTGCGCAAAAAACTGGCATTTGCCGTC
ATGGCCCTGGCCATTCCTTC

Product: outer membrane autotransporter barrel domain protein

Products: NA

Alternate protein names: Outer membrane protein 5; Polymorphic membrane protein 10 [H]

Number of amino acids: Translated: 815; Mature: 815

Protein sequence:

>815_residues
MVIGDNALFRGNWHGAIPIEQNYNGGAIWSRGGNIIIGNHAEFDGNYVFSDRQACQGGVFYDDFFGGAITVGADAVFTGN
FVFSTNYSAAGGAMFVRKDGQKYAAETGAITIGPNPSFIKNFAYSGSADAYGGVIYSDGDISFSDGATFINNYAKTSGGA
ITMGGKCDLLALTKDVLFSGNMAGGVVIGQSDDGFPVVENGIANAIDMNGSLFSSLYTPNLTLAAEERREIRFNDPITSR
NEDPGRPMTLTLNRYTDGEGNVRDTDGTIVFSGELYQGEDTHLAASRYNSFLADATLYGGALLLEHDVVFGRNPEEITDK
RYNSSLTVEKGVLEITGGSKANASSFTLSGPGAVLRPGESAFINTHNADLSHGFTFDMRHQLQAGPVFGPGLMLSALDSF
TAGGYIGVADTGANAPRFYADRSWKQDRVFHVLTDVQHIHEGDFDGAVSQATGTARVDDPYAYTGTWSHRWTDADGDGYA
EQLQLVWKADGTPISRVDPELAGELAVNSLWSSASNAAALGGNVLSRLSVPRLADRHARNLWGMGLGDFARQRSRGGVDG
YDYNGGGYSVGADSGMGGEDEGIWGIAFGQLCGHARSRDFQGRNTQDTRMGSLYWGRLMEESNRAYWIFKGSLTWAETRN
NMTSRLSGAPASRGKWNNETWLAQAEVSRTADCAGGWRLTPFVRMEFTHGRQDAFREQGGYGRDFGGAALKRLSIPVGLE
IGRTDEWKGRPWAQSLRVSYVGDVLRDVPEAAVYSPYSDMGWRGRAVSPERHGLRAEYNTFLQCNERWSVYGGYGLEVRG
SSCYHRVNAGVSRSF

Sequences:

>Translated_815_residues
MVIGDNALFRGNWHGAIPIEQNYNGGAIWSRGGNIIIGNHAEFDGNYVFSDRQACQGGVFYDDFFGGAITVGADAVFTGN
FVFSTNYSAAGGAMFVRKDGQKYAAETGAITIGPNPSFIKNFAYSGSADAYGGVIYSDGDISFSDGATFINNYAKTSGGA
ITMGGKCDLLALTKDVLFSGNMAGGVVIGQSDDGFPVVENGIANAIDMNGSLFSSLYTPNLTLAAEERREIRFNDPITSR
NEDPGRPMTLTLNRYTDGEGNVRDTDGTIVFSGELYQGEDTHLAASRYNSFLADATLYGGALLLEHDVVFGRNPEEITDK
RYNSSLTVEKGVLEITGGSKANASSFTLSGPGAVLRPGESAFINTHNADLSHGFTFDMRHQLQAGPVFGPGLMLSALDSF
TAGGYIGVADTGANAPRFYADRSWKQDRVFHVLTDVQHIHEGDFDGAVSQATGTARVDDPYAYTGTWSHRWTDADGDGYA
EQLQLVWKADGTPISRVDPELAGELAVNSLWSSASNAAALGGNVLSRLSVPRLADRHARNLWGMGLGDFARQRSRGGVDG
YDYNGGGYSVGADSGMGGEDEGIWGIAFGQLCGHARSRDFQGRNTQDTRMGSLYWGRLMEESNRAYWIFKGSLTWAETRN
NMTSRLSGAPASRGKWNNETWLAQAEVSRTADCAGGWRLTPFVRMEFTHGRQDAFREQGGYGRDFGGAALKRLSIPVGLE
IGRTDEWKGRPWAQSLRVSYVGDVLRDVPEAAVYSPYSDMGWRGRAVSPERHGLRAEYNTFLQCNERWSVYGGYGLEVRG
SSCYHRVNAGVSRSF
>Mature_815_residues
MVIGDNALFRGNWHGAIPIEQNYNGGAIWSRGGNIIIGNHAEFDGNYVFSDRQACQGGVFYDDFFGGAITVGADAVFTGN
FVFSTNYSAAGGAMFVRKDGQKYAAETGAITIGPNPSFIKNFAYSGSADAYGGVIYSDGDISFSDGATFINNYAKTSGGA
ITMGGKCDLLALTKDVLFSGNMAGGVVIGQSDDGFPVVENGIANAIDMNGSLFSSLYTPNLTLAAEERREIRFNDPITSR
NEDPGRPMTLTLNRYTDGEGNVRDTDGTIVFSGELYQGEDTHLAASRYNSFLADATLYGGALLLEHDVVFGRNPEEITDK
RYNSSLTVEKGVLEITGGSKANASSFTLSGPGAVLRPGESAFINTHNADLSHGFTFDMRHQLQAGPVFGPGLMLSALDSF
TAGGYIGVADTGANAPRFYADRSWKQDRVFHVLTDVQHIHEGDFDGAVSQATGTARVDDPYAYTGTWSHRWTDADGDGYA
EQLQLVWKADGTPISRVDPELAGELAVNSLWSSASNAAALGGNVLSRLSVPRLADRHARNLWGMGLGDFARQRSRGGVDG
YDYNGGGYSVGADSGMGGEDEGIWGIAFGQLCGHARSRDFQGRNTQDTRMGSLYWGRLMEESNRAYWIFKGSLTWAETRN
NMTSRLSGAPASRGKWNNETWLAQAEVSRTADCAGGWRLTPFVRMEFTHGRQDAFREQGGYGRDFGGAALKRLSIPVGLE
IGRTDEWKGRPWAQSLRVSYVGDVLRDVPEAAVYSPYSDMGWRGRAVSPERHGLRAEYNTFLQCNERWSVYGGYGLEVRG
SSCYHRVNAGVSRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR006315
- InterPro:   IPR006626
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 88155; Mature: 88155

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIGDNALFRGNWHGAIPIEQNYNGGAIWSRGGNIIIGNHAEFDGNYVFSDRQACQGGVF
CEECCCEEEECCCCEEEEEECCCCCCEEEECCCCEEECCCCCCCCCEEECCCHHHCCCCE
YDDFFGGAITVGADAVFTGNFVFSTNYSAAGGAMFVRKDGQKYAAETGAITIGPNPSFIK
EECCCCCEEEECCCEEEECCEEEECCCCCCCCEEEEEECCCHHHHCCCEEEECCCHHHHH
NFAYSGSADAYGGVIYSDGDISFSDGATFINNYAKTSGGAITMGGKCDLLALTKDVLFSG
HCCCCCCCCCCCCEEEECCCEEECCCCHHHHHHHHCCCCEEEECCCCEEEEEEHHHHCCC
NMAGGVVIGQSDDGFPVVENGIANAIDMNGSLFSSLYTPNLTLAAEERREIRFNDPITSR
CCCCCEEEECCCCCCCHHHCCCCCEEECCCHHHHHHCCCCEEEEECCCCCEEECCCCCCC
NEDPGRPMTLTLNRYTDGEGNVRDTDGTIVFSGELYQGEDTHLAASRYNSFLADATLYGG
CCCCCCCEEEEEEEEECCCCCEEECCCEEEEECEEECCCCCEEEHHHHHHHHHHHHHHCC
ALLLEHDVVFGRNPEEITDKRYNSSLTVEKGVLEITGGSKANASSFTLSGPGAVLRPGES
EEEEEECEEECCCHHHHHHHHCCCCEEEECCEEEECCCCCCCCCEEEECCCCCEECCCCC
AFINTHNADLSHGFTFDMRHQLQAGPVFGPGLMLSALDSFTAGGYIGVADTGANAPRFYA
EEEECCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
DRSWKQDRVFHVLTDVQHIHEGDFDGAVSQATGTARVDDPYAYTGTWSHRWTDADGDGYA
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCEECCCCEEEECCCCCEECCCCCCCCH
EQLQLVWKADGTPISRVDPELAGELAVNSLWSSASNAAALGGNVLSRLSVPRLADRHARN
HEEEEEEECCCCCCHHCCHHHHHHHHHHHHHCCCCCCHHHCHHHHHHCCCCHHHHHHHHH
LWGMGLGDFARQRSRGGVDGYDYNGGGYSVGADSGMGGEDEGIWGIAFGQLCGHARSRDF
HCCCCHHHHHHHHHCCCCCCEEECCCCEECCCCCCCCCCCCCEEEEEHHHHHCCCCCCCC
QGRNTQDTRMGSLYWGRLMEESNRAYWIFKGSLTWAETRNNMTSRLSGAPASRGKWNNET
CCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEEHHHHCCHHHHHCCCCCCCCCCCCCE
WLAQAEVSRTADCAGGWRLTPFVRMEFTHGRQDAFREQGGYGRDFGGAALKRLSIPVGLE
EEEEHHHHCCCCCCCCEEECEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCEE
IGRTDEWKGRPWAQSLRVSYVGDVLRDVPEAAVYSPYSDMGWRGRAVSPERHGLRAEYNT
ECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCHHCCCCCCCCE
FLQCNERWSVYGGYGLEVRGSSCYHRVNAGVSRSF
EEEECCCEEEECCEEEEECCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MVIGDNALFRGNWHGAIPIEQNYNGGAIWSRGGNIIIGNHAEFDGNYVFSDRQACQGGVF
CEECCCEEEECCCCEEEEEECCCCCCEEEECCCCEEECCCCCCCCCEEECCCHHHCCCCE
YDDFFGGAITVGADAVFTGNFVFSTNYSAAGGAMFVRKDGQKYAAETGAITIGPNPSFIK
EECCCCCEEEECCCEEEECCEEEECCCCCCCCEEEEEECCCHHHHCCCEEEECCCHHHHH
NFAYSGSADAYGGVIYSDGDISFSDGATFINNYAKTSGGAITMGGKCDLLALTKDVLFSG
HCCCCCCCCCCCCEEEECCCEEECCCCHHHHHHHHCCCCEEEECCCCEEEEEEHHHHCCC
NMAGGVVIGQSDDGFPVVENGIANAIDMNGSLFSSLYTPNLTLAAEERREIRFNDPITSR
CCCCCEEEECCCCCCCHHHCCCCCEEECCCHHHHHHCCCCEEEEECCCCCEEECCCCCCC
NEDPGRPMTLTLNRYTDGEGNVRDTDGTIVFSGELYQGEDTHLAASRYNSFLADATLYGG
CCCCCCCEEEEEEEEECCCCCEEECCCEEEEECEEECCCCCEEEHHHHHHHHHHHHHHCC
ALLLEHDVVFGRNPEEITDKRYNSSLTVEKGVLEITGGSKANASSFTLSGPGAVLRPGES
EEEEEECEEECCCHHHHHHHHCCCCEEEECCEEEECCCCCCCCCEEEECCCCCEECCCCC
AFINTHNADLSHGFTFDMRHQLQAGPVFGPGLMLSALDSFTAGGYIGVADTGANAPRFYA
EEEECCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
DRSWKQDRVFHVLTDVQHIHEGDFDGAVSQATGTARVDDPYAYTGTWSHRWTDADGDGYA
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCEECCCCEEEECCCCCEECCCCCCCCH
EQLQLVWKADGTPISRVDPELAGELAVNSLWSSASNAAALGGNVLSRLSVPRLADRHARN
HEEEEEEECCCCCCHHCCHHHHHHHHHHHHHCCCCCCHHHCHHHHHHCCCCHHHHHHHHH
LWGMGLGDFARQRSRGGVDGYDYNGGGYSVGADSGMGGEDEGIWGIAFGQLCGHARSRDF
HCCCCHHHHHHHHHCCCCCCEEECCCCEECCCCCCCCCCCCCEEEEEHHHHHCCCCCCCC
QGRNTQDTRMGSLYWGRLMEESNRAYWIFKGSLTWAETRNNMTSRLSGAPASRGKWNNET
CCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEEHHHHCCHHHHHCCCCCCCCCCCCCE
WLAQAEVSRTADCAGGWRLTPFVRMEFTHGRQDAFREQGGYGRDFGGAALKRLSIPVGLE
EEEEHHHHCCCCCCCCEEECEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCEE
IGRTDEWKGRPWAQSLRVSYVGDVLRDVPEAAVYSPYSDMGWRGRAVSPERHGLRAEYNT
ECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCHHCCCCCCCCE
FLQCNERWSVYGGYGLEVRGSSCYHRVNAGVSRSF
EEEECCCEEEECCEEEEECCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10539856; 10684935; 10871362; 9864239 [H]