Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735383
Identifier: 187735383
GI number: 187735383
Start: 1051895
End: 1052278
Strand: Direct
Name: 187735383
Synonym: Amuc_0881
Alternate gene names: NA
Gene position: 1051895-1052278 (Clockwise)
Preceding gene: 187735382
Following gene: 187735384
Centisome position: 39.48
GC content: 61.46
Gene sequence:
>384_bases ATGGACGGCCGGAAAGGGGGTCTTGACCCGGAAAGAGGCGGAGCCTACAGTAAGGGCATGAACATAGAAGAAAAAGCTCT GTCCACCTTCCGCACGGCGCCCTGGCGCCACAACTGCGCCCAGGCCGTCTGCGCGGCTCTGGGCAGGGAGGATTTGCTGG AAACCGTTTCCTCCTGCGGTACCGGAAAGGCTCCAGACGGACTGTGCGGCGCCCTTTACGGGGCGCTGCTGTGTACGCCC GTGCAGTCCAGGGAGGAGCTGAGGCGGCGGTTTGTGGAAAAGCTGGGCTATTCCCATTGCAGGGAATTGAAAAAAGAGGG GTCCGTGCCATGCCGGGATTGCGTTGCCTCTGCGGCGGTTCTGGCTTTTAACCTGAGGGAGTGA
Upstream 100 bases:
>100_bases TTGAGGAACTGGCTGCGCGCCTGGAAACCAGCCGGAGGCTTGCCGGAAAGTGAGCTCCTCCGGCGCGGGATGCCGGGAGA AACCGTCTTCCCGCCCCCGG
Downstream 100 bases:
>100_bases ACGCAGAATGACACTGCCGGATTCATGGTTTTTCATGAAAAAAGAGTCTATTGGAATGAAACCAGATAGAATAACATCAT GAAAAAATTGATCTATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDGRKGGLDPERGGAYSKGMNIEEKALSTFRTAPWRHNCAQAVCAALGREDLLETVSSCGTGKAPDGLCGALYGALLCTP VQSREELRRRFVEKLGYSHCRELKKEGSVPCRDCVASAAVLAFNLRE
Sequences:
>Translated_127_residues MDGRKGGLDPERGGAYSKGMNIEEKALSTFRTAPWRHNCAQAVCAALGREDLLETVSSCGTGKAPDGLCGALYGALLCTP VQSREELRRRFVEKLGYSHCRELKKEGSVPCRDCVASAAVLAFNLRE >Mature_127_residues MDGRKGGLDPERGGAYSKGMNIEEKALSTFRTAPWRHNCAQAVCAALGREDLLETVSSCGTGKAPDGLCGALYGALLCTP VQSREELRRRFVEKLGYSHCRELKKEGSVPCRDCVASAAVLAFNLRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13736; Mature: 13736
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGRKGGLDPERGGAYSKGMNIEEKALSTFRTAPWRHNCAQAVCAALGREDLLETVSSCG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCC TGKAPDGLCGALYGALLCTPVQSREELRRRFVEKLGYSHCRELKKEGSVPCRDCVASAAV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHH LAFNLRE HHHHCCC >Mature Secondary Structure MDGRKGGLDPERGGAYSKGMNIEEKALSTFRTAPWRHNCAQAVCAALGREDLLETVSSCG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCC TGKAPDGLCGALYGALLCTPVQSREELRRRFVEKLGYSHCRELKKEGSVPCRDCVASAAV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHH LAFNLRE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA