Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735384
Identifier: 187735384
GI number: 187735384
Start: 1052357
End: 1052686
Strand: Direct
Name: 187735384
Synonym: Amuc_0882
Alternate gene names: NA
Gene position: 1052357-1052686 (Clockwise)
Preceding gene: 187735383
Following gene: 187735385
Centisome position: 39.5
GC content: 59.09
Gene sequence:
>330_bases ATGAAAAAATTGATCTATATGATAGCGGCAGCGGCCGTTGCGATTCCGGTGGTGGCCCTGGCCCAGGGAGCCTGCGGCAG CGGCTCCTGCTCCAAGGGAGACAAGGACATGGCTGAAGCCAAAGAGCACATGAAAGAGGGCGCCAAGGCTGCCAAGGACG CCGCCTCCGAAAAAATGAAGGAAGGCAGGCAGGCTGCCAGGGACGCCTATGAAAAGGGCAAGGAAACCGCCAGGGATGCT TATCAGGACAGCAGGGACGCCGTTGACCATGCGGCGGACAGGACTGCCGATAAGGCCGAAGCCGTCGGTGACGCTGTGAA AAACGGTTAA
Upstream 100 bases:
>100_bases GGCTTTTAACCTGAGGGAGTGAACGCAGAATGACACTGCCGGATTCATGGTTTTTCATGAAAAAAGAGTCTATTGGAATG AAACCAGATAGAATAACATC
Downstream 100 bases:
>100_bases CTCAAACGATGAACAATAAAAATATTTGCTTATTATGTGCGAATCCAAGGATCATATGAATAAAGGCTGCGGATGTGCGA ACGATGCCGCTTCCGGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKKLIYMIAAAAVAIPVVALAQGACGSGSCSKGDKDMAEAKEHMKEGAKAAKDAASEKMKEGRQAARDAYEKGKETARDA YQDSRDAVDHAADRTADKAEAVGDAVKNG
Sequences:
>Translated_109_residues MKKLIYMIAAAAVAIPVVALAQGACGSGSCSKGDKDMAEAKEHMKEGAKAAKDAASEKMKEGRQAARDAYEKGKETARDA YQDSRDAVDHAADRTADKAEAVGDAVKNG >Mature_109_residues MKKLIYMIAAAAVAIPVVALAQGACGSGSCSKGDKDMAEAKEHMKEGAKAAKDAASEKMKEGRQAARDAYEKGKETARDA YQDSRDAVDHAADRTADKAEAVGDAVKNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11345; Mature: 11345
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIYMIAAAAVAIPVVALAQGACGSGSCSKGDKDMAEAKEHMKEGAKAAKDAASEKMK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRQAARDAYEKGKETARDAYQDSRDAVDHAADRTADKAEAVGDAVKNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLIYMIAAAAVAIPVVALAQGACGSGSCSKGDKDMAEAKEHMKEGAKAAKDAASEKMK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRQAARDAYEKGKETARDAYQDSRDAVDHAADRTADKAEAVGDAVKNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA