Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is ngr [H]

Identifier: 187735367

GI number: 187735367

Start: 1034186

End: 1034734

Strand: Reverse

Name: ngr [H]

Synonym: Amuc_0865

Alternate gene names: 187735367

Gene position: 1034734-1034186 (Counterclockwise)

Preceding gene: 187735369

Following gene: 187735366

Centisome position: 38.84

GC content: 55.19

Gene sequence:

>549_bases
ATGACTAAGACCATAGAAAACCTGAAAGCTGCCATTACGGGCGAAAGCACCGCCTCCGCCACTTACGCGGCCTATGCCGC
CAAAGCCGCCCAGGAAGGGCAGCCCCTTATTCAGAAATTGTTTGAAGCCGCCTCCAAGGCGGAATCCGTCCACGCCGCCA
ACCACAACAAGGTTCTGGAAAAGCTGGGGGCAACAATGGAGCCCATCGATATCCAGATCCATGTAGGAACCACCGCGGAA
AACCTGAAAGCCGCCATTGCCGGGGAAACCCATGAATTTGAAAGCATGTATCCGGAATTCATCGCTGTGGCGGAAGAGGA
AGGGCAGAAAGCCGCCGTCCGTTCCTTCACGTGGGCCACGGAAGCGGAAAAAGAACATGCCGATTTTTATTCCGTCGCCC
TGAAGGCCCTGGAAAGCGGAGATACCAGTTCCCTGCCCAGGCAATACTGGATATGCCTGGTTTGCGGAGATACGTTCAAA
TCTCTGGAAGGCGTGGATGCGTGCCCCCTCTGCGGCACCAAGGCTGAAAAATTCCTCGTCATCGGATAA

Upstream 100 bases:

>100_bases
GGCTCCCCGTGATGCCGCAGAAAGAGGAATTTGCGTTTTTTCCTCCCTTGAAGGATTTTTTCAGTTGCATCTTTTTAGAA
TTATTATAAATTTATTTCCG

Downstream 100 bases:

>100_bases
ATTCCGTTTGAGCACCGGAGGCCGTCCACGGCACCCAGGAACCGCCCGGAACATTCCGGGCGGTTTTCTGTTTTTGCCGC
AGCAGTCCATGAAAGAAAAC

Product: Rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLEKLGATMEPIDIQIHVGTTAE
NLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWATEAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFK
SLEGVDACPLCGTKAEKFLVIG

Sequences:

>Translated_182_residues
MTKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLEKLGATMEPIDIQIHVGTTAE
NLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWATEAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFK
SLEGVDACPLCGTKAEKFLVIG
>Mature_181_residues
TKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLEKLGATMEPIDIQIHVGTTAEN
LKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWATEAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFKS
LEGVDACPLCGTKAEKFLVIG

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 19532; Mature: 19401

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLE
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHH
KLGATMEPIDIQIHVGTTAENLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWAT
HHCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFKSLEGVDACPLCGTKAEKFLV
HCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCHHHHHCCCCCCCCCCCCCCEEEE
IG
EC
>Mature Secondary Structure 
TKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLE
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHH
KLGATMEPIDIQIHVGTTAENLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWAT
HHCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFKSLEGVDACPLCGTKAEKFLV
HCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCHHHHHCCCCCCCCCCCCCCEEEE
IG
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]