Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is frvX [H]
Identifier: 187735369
GI number: 187735369
Start: 1035676
End: 1036824
Strand: Reverse
Name: frvX [H]
Synonym: Amuc_0867
Alternate gene names: 187735369
Gene position: 1036824-1035676 (Counterclockwise)
Preceding gene: 187735370
Following gene: 187735367
Centisome position: 38.92
GC content: 58.05
Gene sequence:
>1149_bases ATGAATTTGGAACTGCTTCGTCAGGTTTGCGTGACTCCGGGCGCTCCGGGGTTTGAAGACAAAATCCGCGATTTCATCAT CCAGGAAGTGGCCCCGCTGGTGGACGCCGTGCGCGTGGACAACATGGGCAGCGTGATTGCCATCGTGGAAGGCAAAAACA CGGAAAAAACCATGATGGCCGCCGCCCACATGGATGAAATCGGGTTCATGGTCCGTCACATCGACGACAAGGGGTTCATC AAATTCCTGCCACTGGGCGGCTTTGACGCCAAGACGCTGACGGCCCAGCGCGTCATCGTCCACGGTAAAAAAGACCTCAT CGGCGTCATGGGCGTGAAACCCATCCACGTCATGTCCCCGGCGGAACGTACCAAGCTGCCGGAAGTGACCGACTTCTTCA TTGACCTGGGCATGAGCAAGGAGGAAGTGGAAAAATACGTTTCCGTAGGCGACTCCGTTACCCGTGAACGGGATTTGGTG GAAATGGGGGATTGCGTGAACGTCAAATCTCTGGACAACCGCGCCGGATGCTACGTGCTGATTGAAGCCCTCCGCGCCAT CAAGGCTTCCAGGAAGAAACCCTCCTGCAACTTCGTGGCCGCCTTTACCGTTCAGGAGGAAGTGGGCCTGAGGGGCGCGC AGGCCGGCACGCTGGACATCCAACCGGATTTCTCCATTGCCCTGGATGTCACCATCGCCTGTGACATTCCCGGAACTCCG GCGCACGACCAGGTTTCCCACCTGGGCGCAGGCGCCGCCATCAAGCTGTATGACGGTTCCGTCATTGCAGACCGCCGCAT GGTCAAGTTCATGAAGGCCATGGCAGACGCCAACAAAATTAAATGGCAGACGGAAATGCTGCCGGCGGGAGGCACGGATG CCGGAGCCATGCAGAAATTCGTTCCGGGCGGTTCCATTGCCGGGGCCATTTCCGTTCCCACCCGCAATGTGCACCAGGTT ATTGAAATGGCTCACAAAGACGACCTGGACGCTTCCGTAGCGCTTCTGACCGCCTGCGCCATGAACGTGGACAAATGGGA CTGGTCCTGGAACTCCGTCAACGAATGCCCGGCGGAAAAACCCGCCAAGGCCGCAAAAACGGCAGCCAAGCCCGCCAAAG CCGCTGCCAAGAAGAAAAAGGCCAAATAA
Upstream 100 bases:
>100_bases ACGCCGTTAAGCACGGCAGACGGGTTCCTGCGGAGCCTCCTTCCGGAGGCCGCATTATGGGCTAGCCAACCTTCATGAAA ACCATTACATTGGCGGCATT
Downstream 100 bases:
>100_bases CAGGTCTGGCCATTCATTCATCACTACCCGGCAGGCCGCACCGGAAACGGAGGCGGCCTGCCTGTTTTCAGCCTCCTTCA AATGTTCCGGCAAACTCCGG
Product: peptidase M42 family protein
Products: D-glucose; GDP
Alternate protein names: TET; TET aminopeptidase; Leucyl aminopeptidase; PhTET2 [H]
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MNLELLRQVCVTPGAPGFEDKIRDFIIQEVAPLVDAVRVDNMGSVIAIVEGKNTEKTMMAAAHMDEIGFMVRHIDDKGFI KFLPLGGFDAKTLTAQRVIVHGKKDLIGVMGVKPIHVMSPAERTKLPEVTDFFIDLGMSKEEVEKYVSVGDSVTRERDLV EMGDCVNVKSLDNRAGCYVLIEALRAIKASRKKPSCNFVAAFTVQEEVGLRGAQAGTLDIQPDFSIALDVTIACDIPGTP AHDQVSHLGAGAAIKLYDGSVIADRRMVKFMKAMADANKIKWQTEMLPAGGTDAGAMQKFVPGGSIAGAISVPTRNVHQV IEMAHKDDLDASVALLTACAMNVDKWDWSWNSVNECPAEKPAKAAKTAAKPAKAAAKKKKAK
Sequences:
>Translated_382_residues MNLELLRQVCVTPGAPGFEDKIRDFIIQEVAPLVDAVRVDNMGSVIAIVEGKNTEKTMMAAAHMDEIGFMVRHIDDKGFI KFLPLGGFDAKTLTAQRVIVHGKKDLIGVMGVKPIHVMSPAERTKLPEVTDFFIDLGMSKEEVEKYVSVGDSVTRERDLV EMGDCVNVKSLDNRAGCYVLIEALRAIKASRKKPSCNFVAAFTVQEEVGLRGAQAGTLDIQPDFSIALDVTIACDIPGTP AHDQVSHLGAGAAIKLYDGSVIADRRMVKFMKAMADANKIKWQTEMLPAGGTDAGAMQKFVPGGSIAGAISVPTRNVHQV IEMAHKDDLDASVALLTACAMNVDKWDWSWNSVNECPAEKPAKAAKTAAKPAKAAAKKKKAK >Mature_382_residues MNLELLRQVCVTPGAPGFEDKIRDFIIQEVAPLVDAVRVDNMGSVIAIVEGKNTEKTMMAAAHMDEIGFMVRHIDDKGFI KFLPLGGFDAKTLTAQRVIVHGKKDLIGVMGVKPIHVMSPAERTKLPEVTDFFIDLGMSKEEVEKYVSVGDSVTRERDLV EMGDCVNVKSLDNRAGCYVLIEALRAIKASRKKPSCNFVAAFTVQEEVGLRGAQAGTLDIQPDFSIALDVTIACDIPGTP AHDQVSHLGAGAAIKLYDGSVIADRRMVKFMKAMADANKIKWQTEMLPAGGTDAGAMQKFVPGGSIAGAISVPTRNVHQV IEMAHKDDLDASVALLTACAMNVDKWDWSWNSVNECPAEKPAKAAKTAAKPAKAAAKKKKAK
Specific function: Functions as an aminopeptidase, with a clear preference for leucine as the N-terminal amino acid. However, can also cleave moderately long polypeptide substrates of various compositions in a fairly unspecific manner. Has neither carboxypeptidase nor endop
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=341, Percent_Identity=33.4310850439883, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI87082417, Length=335, Percent_Identity=31.044776119403, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1788727, Length=348, Percent_Identity=30.4597701149425, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: 3.2.1.4
Molecular weight: Translated: 41202; Mature: 41202
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLELLRQVCVTPGAPGFEDKIRDFIIQEVAPLVDAVRVDNMGSVIAIVEGKNTEKTMMA CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH AAHMDEIGFMVRHIDDKGFIKFLPLGGFDAKTLTAQRVIVHGKKDLIGVMGVKPIHVMSP HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHEEECCHHHHHHCCCCCEEEECC AERTKLPEVTDFFIDLGMSKEEVEKYVSVGDSVTRERDLVEMGDCVNVKSLDNRAGCYVL HHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH IEALRAIKASRKKPSCNFVAAFTVQEEVGLRGAQAGTLDIQPDFSIALDVTIACDIPGTP HHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCEEECCCCCEEEEEEEEEECCCCCC AHDQVSHLGAGAAIKLYDGSVIADRRMVKFMKAMADANKIKWQTEMLPAGGTDAGAMQKF CHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHCEEEEEECCCCCCCHHHHHHH VPGGSIAGAISVPTRNVHQVIEMAHKDDLDASVALLTACAMNVDKWDWSWNSVNECPAEK CCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAKAAKTAAKPAKAAAKKKKAK CHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MNLELLRQVCVTPGAPGFEDKIRDFIIQEVAPLVDAVRVDNMGSVIAIVEGKNTEKTMMA CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH AAHMDEIGFMVRHIDDKGFIKFLPLGGFDAKTLTAQRVIVHGKKDLIGVMGVKPIHVMSP HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHEEECCHHHHHHCCCCCEEEECC AERTKLPEVTDFFIDLGMSKEEVEKYVSVGDSVTRERDLVEMGDCVNVKSLDNRAGCYVL HHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH IEALRAIKASRKKPSCNFVAAFTVQEEVGLRGAQAGTLDIQPDFSIALDVTIACDIPGTP HHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCEEECCCCCEEEEEEEEEECCCCCC AHDQVSHLGAGAAIKLYDGSVIADRRMVKFMKAMADANKIKWQTEMLPAGGTDAGAMQKF CHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHCEEEEEECCCCCCCHHHHHHH VPGGSIAGAISVPTRNVHQVIEMAHKDDLDASVALLTACAMNVDKWDWSWNSVNECPAEK CCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAKAAKTAAKPAKAAAKKKKAK CHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPglucose; H2O
Specific reaction: GDP-glucose + H2O = D-glucose + GDP
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]