Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735353
Identifier: 187735353
GI number: 187735353
Start: 1015047
End: 1015370
Strand: Reverse
Name: 187735353
Synonym: Amuc_0851
Alternate gene names: NA
Gene position: 1015370-1015047 (Counterclockwise)
Preceding gene: 187735355
Following gene: 187735352
Centisome position: 38.11
GC content: 62.96
Gene sequence:
>324_bases ATGAGAAAACTCCTGATCCGCTCCTGTCTGATTGCCGGGCTGGCCTGGACCTCTTCCTGCGCCTCCAACAAGGAAACGGC ACCTCAGGACCCCGCCCCAGTTCCTGCCGTTCAGCCGGAACAAACCGCTTCAGCTAACCAGCCCGCACCTTGGGCGCCCG CTCCGGCGCAACAGGAGATTCTTCCAGAGGATGAGAATGAAGAATCCGCACCGGGGCCGGCTGTCTTGCCGGGCGATTTC CGCCCCGGACTGCGCACCCCCCGGCTGCCGGAAACCCTGCTGTACGATCTGGACGGCAAGTTGATTACCCCTTCCGCCCC ATAA
Upstream 100 bases:
>100_bases GCATTCCCCGGTTTCCAAGTAAAAAAGAAATGCCCTTTACACGGTCCATAGCAGGGCTATTCACTTGCCAAGTCCGGATG AAGCTGTAAGAATCCGCGCC
Downstream 100 bases:
>100_bases TCTTTTCTCACCACCATGACTGCGACCATTCCCAAGGGTTTCCACCCCGAACCTTTTTCCTACCACCAAGAGCTTGAACT GGATATTGACGCCCTTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEILPEDENEESAPGPAVLPGDF RPGLRTPRLPETLLYDLDGKLITPSAP
Sequences:
>Translated_107_residues MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEILPEDENEESAPGPAVLPGDF RPGLRTPRLPETLLYDLDGKLITPSAP >Mature_107_residues MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEILPEDENEESAPGPAVLPGDF RPGLRTPRLPETLLYDLDGKLITPSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11347; Mature: 11347
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPEDENEESAPGPAVLPGDFRPGLRTPRLPETLLYDLDGKLITPSAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEECCCCC >Mature Secondary Structure MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPEDENEESAPGPAVLPGDFRPGLRTPRLPETLLYDLDGKLITPSAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA