Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735353

Identifier: 187735353

GI number: 187735353

Start: 1015047

End: 1015370

Strand: Reverse

Name: 187735353

Synonym: Amuc_0851

Alternate gene names: NA

Gene position: 1015370-1015047 (Counterclockwise)

Preceding gene: 187735355

Following gene: 187735352

Centisome position: 38.11

GC content: 62.96

Gene sequence:

>324_bases
ATGAGAAAACTCCTGATCCGCTCCTGTCTGATTGCCGGGCTGGCCTGGACCTCTTCCTGCGCCTCCAACAAGGAAACGGC
ACCTCAGGACCCCGCCCCAGTTCCTGCCGTTCAGCCGGAACAAACCGCTTCAGCTAACCAGCCCGCACCTTGGGCGCCCG
CTCCGGCGCAACAGGAGATTCTTCCAGAGGATGAGAATGAAGAATCCGCACCGGGGCCGGCTGTCTTGCCGGGCGATTTC
CGCCCCGGACTGCGCACCCCCCGGCTGCCGGAAACCCTGCTGTACGATCTGGACGGCAAGTTGATTACCCCTTCCGCCCC
ATAA

Upstream 100 bases:

>100_bases
GCATTCCCCGGTTTCCAAGTAAAAAAGAAATGCCCTTTACACGGTCCATAGCAGGGCTATTCACTTGCCAAGTCCGGATG
AAGCTGTAAGAATCCGCGCC

Downstream 100 bases:

>100_bases
TCTTTTCTCACCACCATGACTGCGACCATTCCCAAGGGTTTCCACCCCGAACCTTTTTCCTACCACCAAGAGCTTGAACT
GGATATTGACGCCCTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEILPEDENEESAPGPAVLPGDF
RPGLRTPRLPETLLYDLDGKLITPSAP

Sequences:

>Translated_107_residues
MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEILPEDENEESAPGPAVLPGDF
RPGLRTPRLPETLLYDLDGKLITPSAP
>Mature_107_residues
MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEILPEDENEESAPGPAVLPGDF
RPGLRTPRLPETLLYDLDGKLITPSAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11347; Mature: 11347

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPEDENEESAPGPAVLPGDFRPGLRTPRLPETLLYDLDGKLITPSAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEECCCCC
>Mature Secondary Structure
MRKLLIRSCLIAGLAWTSSCASNKETAPQDPAPVPAVQPEQTASANQPAPWAPAPAQQEI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPEDENEESAPGPAVLPGDFRPGLRTPRLPETLLYDLDGKLITPSAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA