The gene/protein map for NC_010655 is currently unavailable.
Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is nrdR

Identifier: 187735340

GI number: 187735340

Start: 997516

End: 998007

Strand: Direct

Name: nrdR

Synonym: Amuc_0838

Alternate gene names: 187735340

Gene position: 997516-998007 (Clockwise)

Preceding gene: 187735339

Following gene: 187735341

Centisome position: 37.44

GC content: 51.42

Gene sequence:

>492_bases
ATGAGATGCGTTCAGTGCGGTCATTTGGAAGATAAGGTCATCGACTCCCGTATGTCCAAAGACGGGACGACCATTCGCCG
CCGCCGCGTGTGTTTGAGGTGCGATTACCGTTATACGACCTATGAGCAGATTGAACGCACGGAGTTGCGCGTAGTCAAAA
GGGATAATCTGAGAGAAGCCCTGAATCGTGAAAAGATTTTACGCGGCCTGGTAAAGGCGTGTGAAAAAAGGCCCGTCAGC
ATGGATCGCCTGGACCGCGCCGTGGAAGAGATCATTTCCGAATTGCACCGCGACCATTTGCGCGAAGTCCCTTCCAGCGA
GATTGGCAAGAAGGTGATTGAAAAATTGTATGCCATAGATCCCGTGGCTTATATCCGCTATGTGTCCGTGTACCGCCAGT
TTTCCAATGTGGAGGAGTTTATCCAGGAGATTACGCAGATGCGCCACCAGACGCTTATTGATCCCCTGCAGCGCAAGCTT
CCCATTCTTTAA

Upstream 100 bases:

>100_bases
AGGAAGTTCTGCTTGGGAAGCATTGATCATCAAGTCTACTGTACTATATTTGGCGTACTTTTTCCTTTATGGATGCGTTA
TGTAGTAGTATGGTCGCGCC

Downstream 100 bases:

>100_bases
ATTTCCTGTTCCATGATCGGCTTCCGAAACAACAGACCGTTGCTCAAGCTTGGTGATTGCCTGATTACCGAGTACGGGGA
ACAATGGCTGGCGGATGCTT

Product: ATP-cone domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREALNREKILRGLVKACEKRPVS
MDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAIDPVAYIRYVSVYRQFSNVEEFIQEITQMRHQTLIDPLQRKL
PIL

Sequences:

>Translated_163_residues
MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREALNREKILRGLVKACEKRPVS
MDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAIDPVAYIRYVSVYRQFSNVEEFIQEITQMRHQTLIDPLQRKL
PIL
>Mature_163_residues
MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREALNREKILRGLVKACEKRPVS
MDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAIDPVAYIRYVSVYRQFSNVEEFIQEITQMRHQTLIDPLQRKL
PIL

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=46.9387755102041, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_AKKM8 (B2UQD6)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001877452.1
- GeneID:   6274331
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_0838
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 19517; Mature: 19517

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LNREKILRGLVKACEKRPVSMDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAID
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
PVAYIRYVSVYRQFSNVEEFIQEITQMRHQTLIDPLQRKLPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LNREKILRGLVKACEKRPVSMDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAID
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
PVAYIRYVSVYRQFSNVEEFIQEITQMRHQTLIDPLQRKLPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA