Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735341
Identifier: 187735341
GI number: 187735341
Start: 998020
End: 998547
Strand: Direct
Name: 187735341
Synonym: Amuc_0839
Alternate gene names: NA
Gene position: 998020-998547 (Clockwise)
Preceding gene: 187735340
Following gene: 187735344
Centisome position: 37.46
GC content: 57.2
Gene sequence:
>528_bases ATGATCGGCTTCCGAAACAACAGACCGTTGCTCAAGCTTGGTGATTGCCTGATTACCGAGTACGGGGAACAATGGCTGGC GGATGCTTTGGAGCACGCTGCCCGGCGTGCCGGAACAACCCTTCCGTTCAAGGAAGACCTGCTGGCTTCCGTGCGTTATT ATCTGGAGCATGAGTGCGATTTGTCCGTCATGAAGGTGTCCGAGCTGTATGCGCGTCTGCGCCGCATGCTCACGGAAGTG GGCCTGGAACACCTTGCAAAGGAGCTTAGGGAGGAGATGCCGCCCATGACGGTCTGCGTCGCGGAGATTGCCCGCAGCGT GCCGTTCTGGCTGTTTTTTGCCTGCGAACTGAAAAAGCAGGTGGAGGAATTGCGGGGGCATGGCATTACCAGGTATTGCT TCACAGGCAGGAAGGAATGCGTGATGGCTCTCCGGGGAAGGAAGCGCTGGGACCGTTCCTGCCAGTCTCTGCTGGAAGAC CTGGACTTTCTTCTTTCCCGCTATGAGGAGCAGGCGGCGGATTATTAA
Upstream 100 bases:
>100_bases CAATGTGGAGGAGTTTATCCAGGAGATTACGCAGATGCGCCACCAGACGCTTATTGATCCCCTGCAGCGCAAGCTTCCCA TTCTTTAAATTTCCTGTTCC
Downstream 100 bases:
>100_bases CGGGACTTATCCGTGCCGTATTGGAGTATTCAGCTGCGCAATTCAACAGGTTCCGCTTTCCCGACTGACGGAGCCGGTTC GGAGTGCGGCGCGTTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MIGFRNNRPLLKLGDCLITEYGEQWLADALEHAARRAGTTLPFKEDLLASVRYYLEHECDLSVMKVSELYARLRRMLTEV GLEHLAKELREEMPPMTVCVAEIARSVPFWLFFACELKKQVEELRGHGITRYCFTGRKECVMALRGRKRWDRSCQSLLED LDFLLSRYEEQAADY
Sequences:
>Translated_175_residues MIGFRNNRPLLKLGDCLITEYGEQWLADALEHAARRAGTTLPFKEDLLASVRYYLEHECDLSVMKVSELYARLRRMLTEV GLEHLAKELREEMPPMTVCVAEIARSVPFWLFFACELKKQVEELRGHGITRYCFTGRKECVMALRGRKRWDRSCQSLLED LDFLLSRYEEQAADY >Mature_175_residues MIGFRNNRPLLKLGDCLITEYGEQWLADALEHAARRAGTTLPFKEDLLASVRYYLEHECDLSVMKVSELYARLRRMLTEV GLEHLAKELREEMPPMTVCVAEIARSVPFWLFFACELKKQVEELRGHGITRYCFTGRKECVMALRGRKRWDRSCQSLLED LDFLLSRYEEQAADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20486; Mature: 20486
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFRNNRPLLKLGDCLITEYGEQWLADALEHAARRAGTTLPFKEDLLASVRYYLEHECD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC LSVMKVSELYARLRRMLTEVGLEHLAKELREEMPPMTVCVAEIARSVPFWLFFACELKKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VEELRGHGITRYCFTGRKECVMALRGRKRWDRSCQSLLEDLDFLLSRYEEQAADY HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIGFRNNRPLLKLGDCLITEYGEQWLADALEHAARRAGTTLPFKEDLLASVRYYLEHECD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC LSVMKVSELYARLRRMLTEVGLEHLAKELREEMPPMTVCVAEIARSVPFWLFFACELKKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VEELRGHGITRYCFTGRKECVMALRGRKRWDRSCQSLLEDLDFLLSRYEEQAADY HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA