Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735335
Identifier: 187735335
GI number: 187735335
Start: 984634
End: 984987
Strand: Reverse
Name: 187735335
Synonym: Amuc_0833
Alternate gene names: NA
Gene position: 984987-984634 (Counterclockwise)
Preceding gene: 187735336
Following gene: 187735328
Centisome position: 36.97
GC content: 47.46
Gene sequence:
>354_bases ATGGAAATCATAAAAAATAATAAAATCATCGTTCGCAAGGAAGACGCATCGAAGAAAGTGTTCAAGGGCGTTTCACTGGA TTCGCTCGCTGTCGGAGAGAAATCAATGGTAGCAAAGATGAACTATGTGAAAGGCAACTTCGCCTCCACCCACCAACATC CGCATGAACAATGCGGGTACGTCATTTCAGGCGAATACCGCCTGAACATGGAAATGCCGGAGGAGAATATTGAAGTGCTG CTTCATGCAGGGGACAGCTACGCCATACCGGGCAATACGCCTCATTCCTTTGAGGTGATGGAAAGCGGAGAGGTTGTCGA TGTGTTCACACCGCCAAGGAAGGACTATTTGTAA
Upstream 100 bases:
>100_bases ATACATACATATAAAAAGCTGGGATTCAAGGGACTTGCGGAAAATCACCCGGCATACGAACGCGGAAACATCCAGATGGA ACTGAAGATAACGTATTGAT
Downstream 100 bases:
>100_bases ACAGCCGCATTTGGGGCTGAAGAAACTTCATATCAGCCTAATAAAACTAACGAGAGGATGTCGCCCCCCTATTGCTGCAT TCTGAAAGGATTATCCGGCA
Product: cupin
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MEIIKNNKIIVRKEDASKKVFKGVSLDSLAVGEKSMVAKMNYVKGNFASTHQHPHEQCGYVISGEYRLNMEMPEENIEVL LHAGDSYAIPGNTPHSFEVMESGEVVDVFTPPRKDYL
Sequences:
>Translated_117_residues MEIIKNNKIIVRKEDASKKVFKGVSLDSLAVGEKSMVAKMNYVKGNFASTHQHPHEQCGYVISGEYRLNMEMPEENIEVL LHAGDSYAIPGNTPHSFEVMESGEVVDVFTPPRKDYL >Mature_117_residues MEIIKNNKIIVRKEDASKKVFKGVSLDSLAVGEKSMVAKMNYVKGNFASTHQHPHEQCGYVISGEYRLNMEMPEENIEVL LHAGDSYAIPGNTPHSFEVMESGEVVDVFTPPRKDYL
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13142; Mature: 13142
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIKNNKIIVRKEDASKKVFKGVSLDSLAVGEKSMVAKMNYVKGNFASTHQHPHEQCGY CCEECCCEEEEEECCCCCHHHCCCCCCCEECCCCHHEEEECCCCCCCCCCCCCCHHHCCE VISGEYRLNMEMPEENIEVLLHAGDSYAIPGNTPHSFEVMESGEVVDVFTPPRKDYL EEECCEEEEEECCCCCEEEEEECCCCEECCCCCCCCEEEECCCCEEEEECCCCCCCC >Mature Secondary Structure MEIIKNNKIIVRKEDASKKVFKGVSLDSLAVGEKSMVAKMNYVKGNFASTHQHPHEQCGY CCEECCCEEEEEECCCCCHHHCCCCCCCEECCCCHHEEEECCCCCCCCCCCCCCHHHCCE VISGEYRLNMEMPEENIEVLLHAGDSYAIPGNTPHSFEVMESGEVVDVFTPPRKDYL EEECCEEEEEECCCCCEEEEEECCCCEECCCCCCCCEEEECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA