Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735336
Identifier: 187735336
GI number: 187735336
Start: 984989
End: 985945
Strand: Reverse
Name: 187735336
Synonym: Amuc_0834
Alternate gene names: NA
Gene position: 985945-984989 (Counterclockwise)
Preceding gene: 187735342
Following gene: 187735335
Centisome position: 37.01
GC content: 47.44
Gene sequence:
>957_bases ATGGATTTTTTCGATAGGACAGGTAAAATAGCCATTGGAAGCAGGCTGCGCATGCTGACGGATGCTGTGACGTCTGATGC AAGTCAAATTTATGAATTATACGGCATTGACATAAAGCCAAAGTGGTTTCCCCTGCTTTTCGTTTTGGCCGACGGGAAAG AAAAAACAATAACGGGCATAGCGAAGGAAATAGGGCACAGCCATCCATCCGTGAGCAATATCGTTGGAGAAATGACGGCA AGAGGATTGGTGAAAAGCCTTGAAGACCAGAAGGACAAGAGACGCACCGTCATCGCCCTGGCTCCACATGGAAAAAGGGT CGCCGCCATGCTGACAGAGCTTTGCAAAGACGTGGAGGTCGCCGTAGAGGATATTTCCAAGGAAACGCGCCATGATTTGT GGAGAGCTATCGGCGAATGGGAAGACCGGCTCGCTGAGAAGAGCCTGCTGCAACGGGTCAAAGAAGCCCGGAAAATGAGG GAAAGGGAGCATATCAGGGTAGTTCCTTACGAACCGTGTTACAAAAATACGTTTAAATCACTTAACGTACAGTGGATTAC AAAACATTGGAAGATAGAACCGCACGATCTGGACTATCTTGATCATCCGCAGGAATATATTATCAACAAAGGAGGCTTTA TCTTTGTAGCCCTTTACAGGGGGAAGCCCGTCGGAGTTTGTGCCCTCTGCAAAATGGATGACCCGGTATATGATTATGAA CTGGCGAAACTTGCCGTTCACCCTCATGCGCAGGGCAAAGGCATCGGGGAAATACTTTGCCATGCAGCCATAGACAAAGC AAAGGACATGAAGGCGAAAATTCTTTTTCTTGAAAGCAACACCCTGCTCAAGCCTGCCATACATACATATAAAAAGCTGG GATTCAAGGGACTTGCGGAAAATCACCCGGCATACGAACGCGGAAACATCCAGATGGAACTGAAGATAACGTATTGA
Upstream 100 bases:
>100_bases TTCCCCACCTGCAAGAAAACTAAAATGTGAAAAAATGCTTGCTCGCATGATAATGGCATGGTAGTTACGTAATCAGTTAC GTATTCAATAACGGAAAGAT
Downstream 100 bases:
>100_bases TATGGAAATCATAAAAAATAATAAAATCATCGTTCGCAAGGAAGACGCATCGAAGAAAGTGTTCAAGGGCGTTTCACTGG ATTCGCTCGCTGTCGGAGAG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Transcriptional Regulator MarR Family; GNAT Family Acetyltransferase; Acetyltransferase; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MDFFDRTGKIAIGSRLRMLTDAVTSDASQIYELYGIDIKPKWFPLLFVLADGKEKTITGIAKEIGHSHPSVSNIVGEMTA RGLVKSLEDQKDKRRTVIALAPHGKRVAAMLTELCKDVEVAVEDISKETRHDLWRAIGEWEDRLAEKSLLQRVKEARKMR EREHIRVVPYEPCYKNTFKSLNVQWITKHWKIEPHDLDYLDHPQEYIINKGGFIFVALYRGKPVGVCALCKMDDPVYDYE LAKLAVHPHAQGKGIGEILCHAAIDKAKDMKAKILFLESNTLLKPAIHTYKKLGFKGLAENHPAYERGNIQMELKITY
Sequences:
>Translated_318_residues MDFFDRTGKIAIGSRLRMLTDAVTSDASQIYELYGIDIKPKWFPLLFVLADGKEKTITGIAKEIGHSHPSVSNIVGEMTA RGLVKSLEDQKDKRRTVIALAPHGKRVAAMLTELCKDVEVAVEDISKETRHDLWRAIGEWEDRLAEKSLLQRVKEARKMR EREHIRVVPYEPCYKNTFKSLNVQWITKHWKIEPHDLDYLDHPQEYIINKGGFIFVALYRGKPVGVCALCKMDDPVYDYE LAKLAVHPHAQGKGIGEILCHAAIDKAKDMKAKILFLESNTLLKPAIHTYKKLGFKGLAENHPAYERGNIQMELKITY >Mature_318_residues MDFFDRTGKIAIGSRLRMLTDAVTSDASQIYELYGIDIKPKWFPLLFVLADGKEKTITGIAKEIGHSHPSVSNIVGEMTA RGLVKSLEDQKDKRRTVIALAPHGKRVAAMLTELCKDVEVAVEDISKETRHDLWRAIGEWEDRLAEKSLLQRVKEARKMR EREHIRVVPYEPCYKNTFKSLNVQWITKHWKIEPHDLDYLDHPQEYIINKGGFIFVALYRGKPVGVCALCKMDDPVYDYE LAKLAVHPHAQGKGIGEILCHAAIDKAKDMKAKILFLESNTLLKPAIHTYKKLGFKGLAENHPAYERGNIQMELKITY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36294; Mature: 36294
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFDRTGKIAIGSRLRMLTDAVTSDASQIYELYGIDIKPKWFPLLFVLADGKEKTITGI CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHH AKEIGHSHPSVSNIVGEMTARGLVKSLEDQKDKRRTVIALAPHGKRVAAMLTELCKDVEV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH AVEDISKETRHDLWRAIGEWEDRLAEKSLLQRVKEARKMREREHIRVVPYEPCYKNTFKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHC LNVQWITKHWKIEPHDLDYLDHPQEYIINKGGFIFVALYRGKPVGVCALCKMDDPVYDYE CCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHH LAKLAVHPHAQGKGIGEILCHAAIDKAKDMKAKILFLESNTLLKPAIHTYKKLGFKGLAE HHHEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCC NHPAYERGNIQMELKITY CCCCCCCCCEEEEEEECC >Mature Secondary Structure MDFFDRTGKIAIGSRLRMLTDAVTSDASQIYELYGIDIKPKWFPLLFVLADGKEKTITGI CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHH AKEIGHSHPSVSNIVGEMTARGLVKSLEDQKDKRRTVIALAPHGKRVAAMLTELCKDVEV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH AVEDISKETRHDLWRAIGEWEDRLAEKSLLQRVKEARKMREREHIRVVPYEPCYKNTFKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHC LNVQWITKHWKIEPHDLDYLDHPQEYIINKGGFIFVALYRGKPVGVCALCKMDDPVYDYE CCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHH LAKLAVHPHAQGKGIGEILCHAAIDKAKDMKAKILFLESNTLLKPAIHTYKKLGFKGLAE HHHEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCC NHPAYERGNIQMELKITY CCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA