Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735325
Identifier: 187735325
GI number: 187735325
Start: 968155
End: 969216
Strand: Direct
Name: 187735325
Synonym: Amuc_0823
Alternate gene names: NA
Gene position: 968155-969216 (Clockwise)
Preceding gene: 187735318
Following gene: 187735326
Centisome position: 36.34
GC content: 57.34
Gene sequence:
>1062_bases ATGAAATGTACGGCTTTGTGCATGTGCGCCGCCCTGCTGCCGGTGGGCTTCCTGCAGGCAGGAACCCAGCAGATAGAAGC GCCGCAGGAGGGCTCCGTTATCAGTTTCCATCTGGAAAACGATATGTTCGTGGGGGATGATGATAATTATACCAACGGCG TCCGCTTTGCGTGGATGTCCGGCACCACGTCCCGGAGCCATACGTTTTCCGGCATGCTGGGAACAGTGCTGGGCGGCACG AACGCCTCGGATTCCTGGCGGCGGTTCATGGGCATGAACGGTTCCGCCAACCTGCGCCAGCAGTGGGGTTTGGACCTGAC CCAGCTCATGTACACCCCGGAGCAGAAGGCCACCTATCCCATCTACAACCAGCACCCCTATGTGGGCAACCTGACGCTGG GGCTGACCTCCCTGGTCAAGAATGAAGACCGGGCCAATTCCCTGGAGCTGCAACTCGGCACCACGGGCACGAATTCCCTC GCCAAGGGCTCCCAGCATTTCATCCATAAGCTGTGGGGTATGGAGCAATGGCCCGGCTGGGCCAACCAGCTCCCCGGAGA GATGACCGCCAATTTGTTTTTCAAGCGGTATTACCGCCTGCGCGGACTGGAGAAGCGCTACGGCTCCGGTTTTGAAACGG ATGCCCTGGCTTACTGGCATGCGGACGCCGGCACAGTAAAGGTGCAGGCGGGGGGCGGCATGTCCTTCCGCTTCGGCTAT AATCTGGGCAATACTTCTCCGGAGAACAGCATTCGCGGAGCGACCAGTGCAGCACCTCCCTTCGTTTATAACAGGATGTC CGTTTCCAATTGGGGGTATTACGGTTATATTCATGCTGCCGTGCGAGCCGTGGCTCATGACCTGTATCTGGATGGTACGG TGTTTCGTTCCTCCCCCAAGTATGTGAACAAGTATCCCGTAGTGGGAGAATGGGGTTATGGCTTCGGCTTCCGGTACAAG CGCTCGGAATTGCTTTTCGGCCTGCATTACATGACCAAGGAATACACCCAGCAGGAATCCATGCAGTGTGTGGGCATTCT CCAGCTTCGGCATACTTTTTAA
Upstream 100 bases:
>100_bases GATGAAGTTTGTGGATATTTGCCGGCTTTGAAAAGTGTAAACGCAGAGCATGCCTGATTTTTCCTTGCCACGCGGAAGTG AAACGCACAAACTGCCCCGC
Downstream 100 bases:
>100_bases CGGCTGCGTTTGCAGGCCGTTCATAAACGCAACAGCAGCTTGCAAAGGGCAAGTTTGCTGTTAGAATTAGAATTGCGGAT TCGTATGTAACAGGACAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKCTALCMCAALLPVGFLQAGTQQIEAPQEGSVISFHLENDMFVGDDDNYTNGVRFAWMSGTTSRSHTFSGMLGTVLGGT NASDSWRRFMGMNGSANLRQQWGLDLTQLMYTPEQKATYPIYNQHPYVGNLTLGLTSLVKNEDRANSLELQLGTTGTNSL AKGSQHFIHKLWGMEQWPGWANQLPGEMTANLFFKRYYRLRGLEKRYGSGFETDALAYWHADAGTVKVQAGGGMSFRFGY NLGNTSPENSIRGATSAAPPFVYNRMSVSNWGYYGYIHAAVRAVAHDLYLDGTVFRSSPKYVNKYPVVGEWGYGFGFRYK RSELLFGLHYMTKEYTQQESMQCVGILQLRHTF
Sequences:
>Translated_353_residues MKCTALCMCAALLPVGFLQAGTQQIEAPQEGSVISFHLENDMFVGDDDNYTNGVRFAWMSGTTSRSHTFSGMLGTVLGGT NASDSWRRFMGMNGSANLRQQWGLDLTQLMYTPEQKATYPIYNQHPYVGNLTLGLTSLVKNEDRANSLELQLGTTGTNSL AKGSQHFIHKLWGMEQWPGWANQLPGEMTANLFFKRYYRLRGLEKRYGSGFETDALAYWHADAGTVKVQAGGGMSFRFGY NLGNTSPENSIRGATSAAPPFVYNRMSVSNWGYYGYIHAAVRAVAHDLYLDGTVFRSSPKYVNKYPVVGEWGYGFGFRYK RSELLFGLHYMTKEYTQQESMQCVGILQLRHTF >Mature_353_residues MKCTALCMCAALLPVGFLQAGTQQIEAPQEGSVISFHLENDMFVGDDDNYTNGVRFAWMSGTTSRSHTFSGMLGTVLGGT NASDSWRRFMGMNGSANLRQQWGLDLTQLMYTPEQKATYPIYNQHPYVGNLTLGLTSLVKNEDRANSLELQLGTTGTNSL AKGSQHFIHKLWGMEQWPGWANQLPGEMTANLFFKRYYRLRGLEKRYGSGFETDALAYWHADAGTVKVQAGGGMSFRFGY NLGNTSPENSIRGATSAAPPFVYNRMSVSNWGYYGYIHAAVRAVAHDLYLDGTVFRSSPKYVNKYPVVGEWGYGFGFRYK RSELLFGLHYMTKEYTQQESMQCVGILQLRHTF
Specific function: Unknown
COG id: COG3528
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39570; Mature: 39570
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCTALCMCAALLPVGFLQAGTQQIEAPQEGSVISFHLENDMFVGDDDNYTNGVRFAWMS CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEECCCEEECCCCCCCCCEEEEEEC GTTSRSHTFSGMLGTVLGGTNASDSWRRFMGMNGSANLRQQWGLDLTQLMYTPEQKATYP CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCCCCC IYNQHPYVGNLTLGLTSLVKNEDRANSLELQLGTTGTNSLAKGSQHFIHKLWGMEQWPGW CCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCH ANQLPGEMTANLFFKRYYRLRGLEKRYGSGFETDALAYWHADAGTVKVQAGGGMSFRFGY HHHCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCEEEEEECCCEEEEEEC NLGNTSPENSIRGATSAAPPFVYNRMSVSNWGYYGYIHAAVRAVAHDLYLDGTVFRSSPK CCCCCCCCCCCCCCCCCCCCCEEECEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC YVNKYPVVGEWGYGFGFRYKRSELLFGLHYMTKEYTQQESMQCVGILQLRHTF HHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC >Mature Secondary Structure MKCTALCMCAALLPVGFLQAGTQQIEAPQEGSVISFHLENDMFVGDDDNYTNGVRFAWMS CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEECCCEEECCCCCCCCCEEEEEEC GTTSRSHTFSGMLGTVLGGTNASDSWRRFMGMNGSANLRQQWGLDLTQLMYTPEQKATYP CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCCCCC IYNQHPYVGNLTLGLTSLVKNEDRANSLELQLGTTGTNSLAKGSQHFIHKLWGMEQWPGW CCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCH ANQLPGEMTANLFFKRYYRLRGLEKRYGSGFETDALAYWHADAGTVKVQAGGGMSFRFGY HHHCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCEEEEEECCCEEEEEEC NLGNTSPENSIRGATSAAPPFVYNRMSVSNWGYYGYIHAAVRAVAHDLYLDGTVFRSSPK CCCCCCCCCCCCCCCCCCCCCEEECEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC YVNKYPVVGEWGYGFGFRYKRSELLFGLHYMTKEYTQQESMQCVGILQLRHTF HHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA