Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735317
Identifier: 187735317
GI number: 187735317
Start: 959856
End: 960539
Strand: Reverse
Name: 187735317
Synonym: Amuc_0815
Alternate gene names: NA
Gene position: 960539-959856 (Counterclockwise)
Preceding gene: 187735319
Following gene: 187735315
Centisome position: 36.05
GC content: 53.22
Gene sequence:
>684_bases ATGGCCCAGGCGGCTACCCCTATCTATTCCTGGGAATGGACTGCGGAAGGAGCACAAATAACCGCCCCCAACTGGAACGG TTCCTTCAATTACACTTCCGGCAATGATTACGCCACGTTCGGCAGCAGTTCCGGCACTCCCTATAACTCAAACATAACGG GCATCCAAGACAGTTTCACCGTGAGCTTTGACCTGAAAAACCTGAGTTCCACCAGCAATGGGTGGAAAGACATTTTCAGC CTGTACACCAATGGAACGGTCTCCGGAGAATCCAACAGCATGGTGCTGGAATTCACTAATAACGGAGAACTATACCTCTA CAATAAGGGGTTCGGCGGCCAAACTGGCGGAAATATCAATACGGGATTGACCTGGACGGATCTCCAGCAGGACAGCTGGA CTAATCTGAGCATCGTTTCCGATCTTTCCTCCCAAACGCTTTCCGTGTATGTCAACGGCGCTCTGGCAGGTACGATTACC GAGTGGAATCCATCCTCCCCTGCCCTGACAGGCTCCCAGTTTGGAGCTTCTTTTGGAAATACCCGCCCCATGAACGGCAC TATGGATATCAACAACATCAAATTTTATGACGGCGTTGTGCTTCCTGTGCCGGAAGCAGCCACAGCTTCCCTGGGCCTGT TGGGGCTGGCTGCCCTGATGATGCGCCGCCGCCGGTGCTGCTGA
Upstream 100 bases:
>100_bases TTATAATCCGCTACCCTCCTATCGGATTGATTTTAACCCATATTTCAGAATTTCCGTGAAACGCTCATTTATTATTTTAT CTTTACTGGCAGCGGCAGGC
Downstream 100 bases:
>100_bases AGCAACTTTAACCATTCGCCAAAGGCCGCATGCGGGAAGACGTTTTTCCGCATGCGGCCTTTTCAGTATTAAGAGAATTC CTTTACCCGATTCATGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MAQAATPIYSWEWTAEGAQITAPNWNGSFNYTSGNDYATFGSSSGTPYNSNITGIQDSFTVSFDLKNLSSTSNGWKDIFS LYTNGTVSGESNSMVLEFTNNGELYLYNKGFGGQTGGNINTGLTWTDLQQDSWTNLSIVSDLSSQTLSVYVNGALAGTIT EWNPSSPALTGSQFGASFGNTRPMNGTMDINNIKFYDGVVLPVPEAATASLGLLGLAALMMRRRRCC
Sequences:
>Translated_227_residues MAQAATPIYSWEWTAEGAQITAPNWNGSFNYTSGNDYATFGSSSGTPYNSNITGIQDSFTVSFDLKNLSSTSNGWKDIFS LYTNGTVSGESNSMVLEFTNNGELYLYNKGFGGQTGGNINTGLTWTDLQQDSWTNLSIVSDLSSQTLSVYVNGALAGTIT EWNPSSPALTGSQFGASFGNTRPMNGTMDINNIKFYDGVVLPVPEAATASLGLLGLAALMMRRRRCC >Mature_226_residues AQAATPIYSWEWTAEGAQITAPNWNGSFNYTSGNDYATFGSSSGTPYNSNITGIQDSFTVSFDLKNLSSTSNGWKDIFSL YTNGTVSGESNSMVLEFTNNGELYLYNKGFGGQTGGNINTGLTWTDLQQDSWTNLSIVSDLSSQTLSVYVNGALAGTITE WNPSSPALTGSQFGASFGNTRPMNGTMDINNIKFYDGVVLPVPEAATASLGLLGLAALMMRRRRCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24316; Mature: 24185
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAATPIYSWEWTAEGAQITAPNWNGSFNYTSGNDYATFGSSSGTPYNSNITGIQDSFT CCCCCCCEEEEEEECCCCEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEE VSFDLKNLSSTSNGWKDIFSLYTNGTVSGESNSMVLEFTNNGELYLYNKGFGGQTGGNIN EEEEECCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCC TGLTWTDLQQDSWTNLSIVSDLSSQTLSVYVNGALAGTITEWNPSSPALTGSQFGASFGN CCEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHCCCCCC TRPMNGTMDINNIKFYDGVVLPVPEAATASLGLLGLAALMMRRRRCC CCCCCCEEEECCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQAATPIYSWEWTAEGAQITAPNWNGSFNYTSGNDYATFGSSSGTPYNSNITGIQDSFT CCCCCCEEEEEEECCCCEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEE VSFDLKNLSSTSNGWKDIFSLYTNGTVSGESNSMVLEFTNNGELYLYNKGFGGQTGGNIN EEEEECCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCC TGLTWTDLQQDSWTNLSIVSDLSSQTLSVYVNGALAGTITEWNPSSPALTGSQFGASFGN CCEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHCCCCCC TRPMNGTMDINNIKFYDGVVLPVPEAATASLGLLGLAALMMRRRRCC CCCCCCEEEECCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA