Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735300
Identifier: 187735300
GI number: 187735300
Start: 934455
End: 935240
Strand: Reverse
Name: 187735300
Synonym: Amuc_0797
Alternate gene names: NA
Gene position: 935240-934455 (Counterclockwise)
Preceding gene: 187735301
Following gene: 187735299
Centisome position: 35.11
GC content: 59.29
Gene sequence:
>786_bases ATGGCTCCCCGCACCCCGGATATTCTGGACTGCGCTTCCGCCCAATGGATCGGCAAACGCCGCGAGCAGGAAGACGTGGT TAAAAGTCTTCCCGCCGCCGGCGGGATGCTGGGCATCGTGTGCGACGGCATGGGAGGGCATCTTCGCGGAGATTGCGCCT CCTGTGTGGTGGCGCAGGAATTTGCCGCGGTATTTGCGGAAAGCGGCATCGAGGATATCCCGGAACGTTTAACGGCGGCT TTGCATGCTGCCAACAGGGCATTGTCCGCCATTCAGAAGGAACCGGAGGAATCCGGAACCACATTGCTGGCCGTCTTCAT CCGCGACCATTTCCTGTGGTGGATCAGCGTGGGAGACTCCCCCCTGTATTTATGGAGCGGGGCGGACAGCTTTCGGATGG ACCGGCTGAATGAAGACCATTCCATGAGGCCGATTGCGGATAGCCTTTACCGGAAGGGGAAAATGTCACTTCAGGGTGCG CTCCGGCAGCGTTGCATTCTCCGTTCCGCCGTTATGGGCGGTCCCATGGAACTGGTGGACATCAGCGCCATGCCCCTGCT CTTGCATCCGGGAGATGCGGTGCTGGCCTGCTCGGATGGCTTGCAGGTTTGGAGCGAGCTGTTGAGAGAACCTTCTTTCC TGGCTCTTCAAAAGGCCAGGGATTGTTCCAGCAGGGAGCTGGTGGGGATCATTATGGAACAGGTGAAGGATATGCTGGAG CCCCAGCAGGATAATGCCTCCGTCTGGGCTGCCGTCATGCGGAAACCCTGCGAGGGCGGTAAATAA
Upstream 100 bases:
>100_bases ACCGCGTCGTCATGATGCTGACGGGGGCCTCTTCCATCCGTGACGTGCTGCTCTTCCCGCAGTTGAAACGTAAGGACAGT TAATCCGAACCACCGGCCGC
Downstream 100 bases:
>100_bases GCTTATTCCGGCGAAGGAAGTGCGGGAGCATGGTTCTGGGCGGGCGGGAAAATGTTCGCGCTGTTCTTATTGCGCCTTAA ACAGGGCTTTTCCGCAGACC
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Protein Serine/Threonine Phosphatases; Serine/Threonine Protein Phosphatase; C Domain-Containing Protein
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MAPRTPDILDCASAQWIGKRREQEDVVKSLPAAGGMLGIVCDGMGGHLRGDCASCVVAQEFAAVFAESGIEDIPERLTAA LHAANRALSAIQKEPEESGTTLLAVFIRDHFLWWISVGDSPLYLWSGADSFRMDRLNEDHSMRPIADSLYRKGKMSLQGA LRQRCILRSAVMGGPMELVDISAMPLLLHPGDAVLACSDGLQVWSELLREPSFLALQKARDCSSRELVGIIMEQVKDMLE PQQDNASVWAAVMRKPCEGGK
Sequences:
>Translated_261_residues MAPRTPDILDCASAQWIGKRREQEDVVKSLPAAGGMLGIVCDGMGGHLRGDCASCVVAQEFAAVFAESGIEDIPERLTAA LHAANRALSAIQKEPEESGTTLLAVFIRDHFLWWISVGDSPLYLWSGADSFRMDRLNEDHSMRPIADSLYRKGKMSLQGA LRQRCILRSAVMGGPMELVDISAMPLLLHPGDAVLACSDGLQVWSELLREPSFLALQKARDCSSRELVGIIMEQVKDMLE PQQDNASVWAAVMRKPCEGGK >Mature_260_residues APRTPDILDCASAQWIGKRREQEDVVKSLPAAGGMLGIVCDGMGGHLRGDCASCVVAQEFAAVFAESGIEDIPERLTAAL HAANRALSAIQKEPEESGTTLLAVFIRDHFLWWISVGDSPLYLWSGADSFRMDRLNEDHSMRPIADSLYRKGKMSLQGAL RQRCILRSAVMGGPMELVDISAMPLLLHPGDAVLACSDGLQVWSELLREPSFLALQKARDCSSRELVGIIMEQVKDMLEP QQDNASVWAAVMRKPCEGGK
Specific function: Unknown
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28507; Mature: 28376
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRTPDILDCASAQWIGKRREQEDVVKSLPAAGGMLGIVCDGMGGHLRGDCASCVVAQE CCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH FAAVFAESGIEDIPERLTAALHAANRALSAIQKEPEESGTTLLAVFIRDHFLWWISVGDS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHEEEEEEECCC PLYLWSGADSFRMDRLNEDHSMRPIADSLYRKGKMSLQGALRQRCILRSAVMGGPMELVD EEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHEEE ISAMPLLLHPGDAVLACSDGLQVWSELLREPSFLALQKARDCSSRELVGIIMEQVKDMLE CCCCCEEECCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC PQQDNASVWAAVMRKPCEGGK CCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure APRTPDILDCASAQWIGKRREQEDVVKSLPAAGGMLGIVCDGMGGHLRGDCASCVVAQE CCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH FAAVFAESGIEDIPERLTAALHAANRALSAIQKEPEESGTTLLAVFIRDHFLWWISVGDS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHEEEEEEECCC PLYLWSGADSFRMDRLNEDHSMRPIADSLYRKGKMSLQGALRQRCILRSAVMGGPMELVD EEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHEEE ISAMPLLLHPGDAVLACSDGLQVWSELLREPSFLALQKARDCSSRELVGIIMEQVKDMLE CCCCCEEECCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC PQQDNASVWAAVMRKPCEGGK CCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA