Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735281
Identifier: 187735281
GI number: 187735281
Start: 916014
End: 917036
Strand: Direct
Name: 187735281
Synonym: Amuc_0778
Alternate gene names: NA
Gene position: 916014-917036 (Clockwise)
Preceding gene: 187735280
Following gene: 187735283
Centisome position: 34.38
GC content: 57.18
Gene sequence:
>1023_bases ATGGCATTTTGGAGGTTTTGGTTCATCTTTTTCCCTTTCACGGCGCTTCTCTTTTCCATGGTGCATGGCAGTCCTCTGAA CGCACCCGTCATCACCCTTGGAGAGAAAAAAAGCCTGTTCGGAGAAAAAGCGCAGGCCAATGAATATGTCAGCTATGCCC TTTATTACTGGCCGGACCCCGCCAATCCGGACGGTCCTTACAAACCCATTGACGGCAAAAAGAACAAACGGCTCCGCAGC ATGGACGACAGCGGCAGGATGGCCGCTTTCATCAGCACGGTCTGCAGCCTGGGACGGCAGTATGAACTCGACAGGGATCC GCAGGCCGCCTCCAGGGCCGGGCAATGGCTGAAAGCCTGGTTCATTGCTCCGGCAACCCGCATGCAGCCCCATCTGAAAT ATGCCCAAATTCGCCCCGGACACCGGACGGAAGGAGACGGAGGAGGCATCATCGACCTTTACCGCATGCCCGAATTCCTG GAAGCTTTGACGGCGTTGAAATGCTCCAATGCCCTAACGGCAGAGGAATGGAAGCAGGTGGACGCATGGCTGAACCAGTA TTACACATGGCTGACTACCAGCAGGCAGGGCAGGCATGCACACACGCGCAGCAACAACCATTATCTGTTTTATGTGGCGC AATGCGCCCATTTGGCATCCTTCCTGGGCCGCAGCCATGAAGCGGCCCAATGGCTGGCAGAAGCCTTCGCCAACCTGGAC CGCCACATCGCTCCCGACGGATCCCAGCCCGAAGAACTCAAACGGGCGGAACCCTGGCAATACAGCGTTTACACTCTTCA GGCATGGGGATACCTGGTGCATCTTGCAGAACGCATGGGCGACAAGAACTACCGTTACCGGAAAACACCCGCCGGGGCCT CCATTCAAAAAGCTGTGGACTATCTCCTGCCTTACCGCGCCAACCCTGAAACATGGCCCTGGCAAGGCTCCAGGGCAAAC ACTCCGCTGCCCGCCATCTTTGAACCGGAGCAGGCGGGCAGGCCACAACGGAAATGCTACTGA
Upstream 100 bases:
>100_bases GGATGACCGGGAAAGCGGCCGGAAACGGCTCTGCAAGGAAATCAGGGCATTGCTCCATTTCCCGGTTGTCCCGGCAAAAG GTTCCTGCTTGAATGGGGTA
Downstream 100 bases:
>100_bases ACCGCGCCCGCCGTTAAAAGTATCCGTTTTTCCTGCTTATTGAAAATCCCCTCTCCAGCAGCACGAACGGGGTATTTTCC CGGAAAACGATTTAATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAFWRFWFIFFPFTALLFSMVHGSPLNAPVITLGEKKSLFGEKAQANEYVSYALYYWPDPANPDGPYKPIDGKKNKRLRS MDDSGRMAAFISTVCSLGRQYELDRDPQAASRAGQWLKAWFIAPATRMQPHLKYAQIRPGHRTEGDGGGIIDLYRMPEFL EALTALKCSNALTAEEWKQVDAWLNQYYTWLTTSRQGRHAHTRSNNHYLFYVAQCAHLASFLGRSHEAAQWLAEAFANLD RHIAPDGSQPEELKRAEPWQYSVYTLQAWGYLVHLAERMGDKNYRYRKTPAGASIQKAVDYLLPYRANPETWPWQGSRAN TPLPAIFEPEQAGRPQRKCY
Sequences:
>Translated_340_residues MAFWRFWFIFFPFTALLFSMVHGSPLNAPVITLGEKKSLFGEKAQANEYVSYALYYWPDPANPDGPYKPIDGKKNKRLRS MDDSGRMAAFISTVCSLGRQYELDRDPQAASRAGQWLKAWFIAPATRMQPHLKYAQIRPGHRTEGDGGGIIDLYRMPEFL EALTALKCSNALTAEEWKQVDAWLNQYYTWLTTSRQGRHAHTRSNNHYLFYVAQCAHLASFLGRSHEAAQWLAEAFANLD RHIAPDGSQPEELKRAEPWQYSVYTLQAWGYLVHLAERMGDKNYRYRKTPAGASIQKAVDYLLPYRANPETWPWQGSRAN TPLPAIFEPEQAGRPQRKCY >Mature_339_residues AFWRFWFIFFPFTALLFSMVHGSPLNAPVITLGEKKSLFGEKAQANEYVSYALYYWPDPANPDGPYKPIDGKKNKRLRSM DDSGRMAAFISTVCSLGRQYELDRDPQAASRAGQWLKAWFIAPATRMQPHLKYAQIRPGHRTEGDGGGIIDLYRMPEFLE ALTALKCSNALTAEEWKQVDAWLNQYYTWLTTSRQGRHAHTRSNNHYLFYVAQCAHLASFLGRSHEAAQWLAEAFANLDR HIAPDGSQPEELKRAEPWQYSVYTLQAWGYLVHLAERMGDKNYRYRKTPAGASIQKAVDYLLPYRANPETWPWQGSRANT PLPAIFEPEQAGRPQRKCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39082; Mature: 38950
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFWRFWFIFFPFTALLFSMVHGSPLNAPVITLGEKKSLFGEKAQANEYVSYALYYWPDP CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCHHHHCCEEEEEEEECCCC ANPDGPYKPIDGKKNKRLRSMDDSGRMAAFISTVCSLGRQYELDRDPQAASRAGQWLKAW CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH FIAPATRMQPHLKYAQIRPGHRTEGDGGGIIDLYRMPEFLEALTALKCSNALTAEEWKQV HHCCHHHCCCCCHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHH DAWLNQYYTWLTTSRQGRHAHTRSNNHYLFYVAQCAHLASFLGRSHEAAQWLAEAFANLD HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RHIAPDGSQPEELKRAEPWQYSVYTLQAWGYLVHLAERMGDKNYRYRKTPAGASIQKAVD HCCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHH YLLPYRANPETWPWQGSRANTPLPAIFEPEQAGRPQRKCY HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure AFWRFWFIFFPFTALLFSMVHGSPLNAPVITLGEKKSLFGEKAQANEYVSYALYYWPDP CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCHHHHCCEEEEEEEECCCC ANPDGPYKPIDGKKNKRLRSMDDSGRMAAFISTVCSLGRQYELDRDPQAASRAGQWLKAW CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH FIAPATRMQPHLKYAQIRPGHRTEGDGGGIIDLYRMPEFLEALTALKCSNALTAEEWKQV HHCCHHHCCCCCHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHH DAWLNQYYTWLTTSRQGRHAHTRSNNHYLFYVAQCAHLASFLGRSHEAAQWLAEAFANLD HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RHIAPDGSQPEELKRAEPWQYSVYTLQAWGYLVHLAERMGDKNYRYRKTPAGASIQKAVD HCCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHH YLLPYRANPETWPWQGSRANTPLPAIFEPEQAGRPQRKCY HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA