Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735283

Identifier: 187735283

GI number: 187735283

Start: 917723

End: 917941

Strand: Direct

Name: 187735283

Synonym: Amuc_0780

Alternate gene names: NA

Gene position: 917723-917941 (Clockwise)

Preceding gene: 187735281

Following gene: 187735288

Centisome position: 34.45

GC content: 54.34

Gene sequence:

>219_bases
ATGAATACGGTCATCTGTGGACAGCCTGTTCTGGAACAGGCCATCATGTTTTCCGGCATGAAGGAACACAATTCCCGAAC
CTATTCCAACCTGTCCGGAACAACGGTAAACAGGCTGTATCATTGCCCCGCTCCGGAACATCTTTGTTCGCTGCCGTGCC
GGGAGCGGAAGAACATCCCGCCGGCGTACCCCGGCAATCTAACCCATGCCGCCATTTAA

Upstream 100 bases:

>100_bases
CAAAAGCCATTTCATGAAAAATGATATAATCCAAAAAATATCAGGATGCAACTACTCTTTAGAGAAACCGTTCCCGCACT
GTTCACACGGCCGGAAACAG

Downstream 100 bases:

>100_bases
AAAGACTGCACATTAAACAAGAAAAACCGGGCGCCCTGCAACATTCAATGGCATGGCGTGAGACATTTCACTCATTTTTT
CAATTCTTCGGCTATTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MNTVICGQPVLEQAIMFSGMKEHNSRTYSNLSGTTVNRLYHCPAPEHLCSLPCRERKNIPPAYPGNLTHAAI

Sequences:

>Translated_72_residues
MNTVICGQPVLEQAIMFSGMKEHNSRTYSNLSGTTVNRLYHCPAPEHLCSLPCRERKNIPPAYPGNLTHAAI
>Mature_72_residues
MNTVICGQPVLEQAIMFSGMKEHNSRTYSNLSGTTVNRLYHCPAPEHLCSLPCRERKNIPPAYPGNLTHAAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7981; Mature: 7981

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVICGQPVLEQAIMFSGMKEHNSRTYSNLSGTTVNRLYHCPAPEHLCSLPCRERKNIP
CCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCC
PAYPGNLTHAAI
CCCCCCCCCCCC
>Mature Secondary Structure
MNTVICGQPVLEQAIMFSGMKEHNSRTYSNLSGTTVNRLYHCPAPEHLCSLPCRERKNIP
CCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCC
PAYPGNLTHAAI
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA