Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735274
Identifier: 187735274
GI number: 187735274
Start: 905682
End: 906335
Strand: Direct
Name: 187735274
Synonym: Amuc_0770
Alternate gene names: NA
Gene position: 905682-906335 (Clockwise)
Preceding gene: 187735267
Following gene: 187735276
Centisome position: 34.0
GC content: 55.35
Gene sequence:
>654_bases ATGAACACTTTCTCTCATCTCAGTCCGTTTCTGGCCGTCATTTCGGGAAGCCTCTTCTCCGGAACGGCTCTCTGTAACGA CATCGTGCTGCCTCCGCCAGATAAAAAGGGAGGAAAGCCCCTCATGCAGGTTCTTCATGAACGGCATTCCACCAGGTCCT TTGCAGACAAACCTATCCCGGTGGAAATCCTGTCCTCCCTGCTCTGGGCGGCGCAAGGCGTCAACCGGGACGATCCCGAC TACCGCACGGCGCCGTCTTCCCGGAATTCCAATGAAATAGAAATCTATGTCGTTCTGCCGCAGGGCACCTATCTTTACAG GCCGGAAACCCACCGACTGGAGAAAGTGGTTCAGGGCGACATGCGGGCCGCTACGGGAACACAGGAATTCGCGGCTACCG CGCCGTTAAACCTGGTCTATGTAGTAGACCAGTCCAAACAGCCGGGAGACTTTGATGCCAGGAGAAAGCTGGTCACGGCC TGCACGGATGCGGGGTTTATTGGAGAAAACGTTTACCTTTTCTGTGCTTCCGAAGGGCTCGGCACCGTGTTCCGCGCCAT GATTAACGCCAATTATATCCAGCAGTGCCTGAAGCTCCCCGTCCTCAAAAAAGTCCTGTACGCCCAGAGTGTCGGCTATC CGTCAAAATCCTGA
Upstream 100 bases:
>100_bases CATTTTATAGTATCGGGCCTCTTCATGTTTCCAAAAACATGAGAAAAACACAAGTATCCTGCTGATTATTCCTGGCTGAC ATATGTTTTTCCCGTTGCCT
Downstream 100 bases:
>100_bases AAAAACCATAAGCCGGAACGCTGTGAGACTCGCCGTTCCATCGGCGGCTCTTCCTCATGCCTGCGAAAAACCGTCATGGG AACCGCCGTTCCCATGGAGA
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNTFSHLSPFLAVISGSLFSGTALCNDIVLPPPDKKGGKPLMQVLHERHSTRSFADKPIPVEILSSLLWAAQGVNRDDPD YRTAPSSRNSNEIEIYVVLPQGTYLYRPETHRLEKVVQGDMRAATGTQEFAATAPLNLVYVVDQSKQPGDFDARRKLVTA CTDAGFIGENVYLFCASEGLGTVFRAMINANYIQQCLKLPVLKKVLYAQSVGYPSKS
Sequences:
>Translated_217_residues MNTFSHLSPFLAVISGSLFSGTALCNDIVLPPPDKKGGKPLMQVLHERHSTRSFADKPIPVEILSSLLWAAQGVNRDDPD YRTAPSSRNSNEIEIYVVLPQGTYLYRPETHRLEKVVQGDMRAATGTQEFAATAPLNLVYVVDQSKQPGDFDARRKLVTA CTDAGFIGENVYLFCASEGLGTVFRAMINANYIQQCLKLPVLKKVLYAQSVGYPSKS >Mature_217_residues MNTFSHLSPFLAVISGSLFSGTALCNDIVLPPPDKKGGKPLMQVLHERHSTRSFADKPIPVEILSSLLWAAQGVNRDDPD YRTAPSSRNSNEIEIYVVLPQGTYLYRPETHRLEKVVQGDMRAATGTQEFAATAPLNLVYVVDQSKQPGDFDARRKLVTA CTDAGFIGENVYLFCASEGLGTVFRAMINANYIQQCLKLPVLKKVLYAQSVGYPSKS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 - InterPro: IPR020051 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 23869; Mature: 23869
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFSHLSPFLAVISGSLFSGTALCNDIVLPPPDKKGGKPLMQVLHERHSTRSFADKPIP CCCHHHHHHHHHHHHCCHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC VEILSSLLWAAQGVNRDDPDYRTAPSSRNSNEIEIYVVLPQGTYLYRPETHRLEKVVQGD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHH MRAATGTQEFAATAPLNLVYVVDQSKQPGDFDARRKLVTACTDAGFIGENVYLFCASEGL HHHHCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCH GTVFRAMINANYIQQCLKLPVLKKVLYAQSVGYPSKS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTFSHLSPFLAVISGSLFSGTALCNDIVLPPPDKKGGKPLMQVLHERHSTRSFADKPIP CCCHHHHHHHHHHHHCCHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC VEILSSLLWAAQGVNRDDPDYRTAPSSRNSNEIEIYVVLPQGTYLYRPETHRLEKVVQGD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHH MRAATGTQEFAATAPLNLVYVVDQSKQPGDFDARRKLVTACTDAGFIGENVYLFCASEGL HHHHCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCH GTVFRAMINANYIQQCLKLPVLKKVLYAQSVGYPSKS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]