Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735273
Identifier: 187735273
GI number: 187735273
Start: 903163
End: 905391
Strand: Reverse
Name: 187735273
Synonym: Amuc_0769
Alternate gene names: NA
Gene position: 905391-903163 (Counterclockwise)
Preceding gene: 187735275
Following gene: 187735272
Centisome position: 33.98
GC content: 57.02
Gene sequence:
>2229_bases ATGAATCCTGTCAATCCTCTGCGTCCCGGTTTTCCCAAGCATAAAAAATCCTCTTCCGGCGGAATTATTATAACTATTGT CCTGGTGCTGGCTCTTGCCGCCGGAGGGGTGGCTTACCACCGGGTTTCCGTTCAACGTAAGGCTGCCGCCGCTGAGCTGG CGGCCAGAAAGGAGGCGGAAGCGAAAGCGGCGCGTGCGCGGAAAGCCGCGGAACTGGAGGCGGCGCGCAGGAAGGCGGAG GAACGGGCGCGCGCGGAGGCGGAGGAAAAAGCCCGTCTTGAGGCGGAACGCCTGGCTGCTGAGGAAGCCGCCGGAAAACG GCAGAACAAGGAACCGGAAGTGGCGGAGCCTTCCCCTGAGGAACCGAAGGAAGAACCCGTGGTCCAGGAGGAAGATCCGC GGCTGGAGATTTTCAAGAAGCCTGTTCTTCTGGTCAGCCTGAAGGCCAATAACGCCGCCAACAGAAAGTTGTTTACGGAT GCTTTCAATCTGGCCCTGGAAACGGGCCGCTATGACTTGTATGCCGATTTCCTGCGCTCCAATTTGGAACGGGATGCCGT GAAGGTCATCAAATTCGGCAAATTTGACGCGTCCATGTACGATCAGAGCCCGTACCTCATGCGCGCCAATGAGCTGTACC AGCTCATCAGCAAAGTGGGAGCGGAAACCATCCAGGAACAAATCAAGGAGAGTTCCCCCAGGTATTTCTATCCATGGCTT TTTTCAGATCCTTCCGATCCCCTGAGACTTTTCCTGCGCACGATGGCGCGGGAGCAGACACCCGGGGAGGAGTGGGGAGG GATTTTGAGGAAGTGGGCGGAATTCTGGATGAAAACCTCTGCCATGCCCCGGAGCAGGTATTCCTCCCTGGCGCTGGCCT GCGCCATGCTGAATCCCCGCATCGCTTCCAGCCCGTCCAAGCTGAGGGCGTCTTCTTCCACCAATATTTCCACCACGCCT TTGACGCTGGAACAGGTATTCGAGTACTTCATGGAGATGGATGAAGCCCGTGAGCTTCTCACGGACATTTCCAAATTAAG CCCTTCCGAGCTGTTGTTTGTGGTGGATGTGCGTCTGCCGAGGTCGGAGATGGATTGGGCGCGCAAAAAGGTGCGCCTTA CCCGGAAAGGATGGGGCGGAGCCTATTCCATGATCCGTTACCGGATGGACCGCGCCGCACTGGGCAAGGACCCTTATACT AATTATACCTTCCAGGAGATTCTGGATGAAGGCGGCATTTGCATGGACCAGGCCTATTTTGCGGTGAATACCGCCAAATG CAACGGTATTCCCTCCGCCTATGTTACCGGGGACGGCAACCGCGGGCCGCATGCCTGGGTCAATCTGCTGACGACGGATG AAACCTGGCAGTCCTACGGCGGGTACGGATATAATACGGGGCATTTTTCCCATCCGCACAACTGCAAGTCAAAGCATGAA TCCACCCTTCTCCAGGGTATGGACAAGAAGGTGAATGGCGCCCGGCTGGATACTTCCCTGGATTATCTTTCCCTGGCGGA CCTGTTTGAGGAGATGCAGAAGCCGGATTGCGCCCGGGTAATGCTGGAAGCCGCCACACAGGCCACTCCCGGCAGCCCCC TGGGCTGGGAACGCCTGATTGCTCTGATGGGCCGCCCGGAGAGCGGCACGAAGCTGGAAGAATGGGATGAACTGGTGGCC ATGATTAAGCGCAAGTTCCGTTCCCGTCCGGATTATCTGGCCATGGCCGCCCGCGTGGAAGATGAGTATATTTTCCCCAT GAGGGACGCTTCCACCAATAAACGCCATGTTGCCCGCGATTTGAAGAAGCTGGAAAAGGAGACGGACGAGGGGCGCAGCG ACCTGACTTCCGCCGCCATCAAGCGGCAGGCGGATCTCCTGATGGAAAACGGGGACAAGGCCGGGGTGGCTGCCCTGTAC CGGAAGTCCATGAAGGATTATGCGCGCCGCGCGGAAGTATTTGAAGCGCTGATGGGGCAATATTACGAGTACGTTTCCCA GGATCAGGAGGCCGTGCTTCAGATGGCCAAGGAGGCGGAATCTTCCTACAACCGGTATATCCGGACTAAATCGGGCGATT ATTTCAAGGTAAAGAAGGAAGCCGCCATCCAGCGGAGGATAGCCGGGTATTATGAAAAGGGAGGTAATGGGAAAAAAGCC GACTCCCTGCGCAAGGATGCGGAGAAGCGGGAGAAGAACAGCAAGAAGGGCATCCGGGAAGAAAATTAG
Upstream 100 bases:
>100_bases GACCTCGGAAAGGTATTGCGCTTTTATGTCACACGGAACAGGGATAAAACCGTCTCATCCCCCTCCCCAATTTGCTTCAA CGCGTTCAAGCTGCATCCCC
Downstream 100 bases:
>100_bases TGCGGAGGTGCCTGCGGCCTTTCATTTTCGGGTGGGTTCGGCCGTGTTCGTTTCCGGCTGCGGCATACCCGCGGAATGAA CGTTTTTAGACTGGAATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MNPVNPLRPGFPKHKKSSSGGIIITIVLVLALAAGGVAYHRVSVQRKAAAAELAARKEAEAKAARARKAAELEAARRKAE ERARAEAEEKARLEAERLAAEEAAGKRQNKEPEVAEPSPEEPKEEPVVQEEDPRLEIFKKPVLLVSLKANNAANRKLFTD AFNLALETGRYDLYADFLRSNLERDAVKVIKFGKFDASMYDQSPYLMRANELYQLISKVGAETIQEQIKESSPRYFYPWL FSDPSDPLRLFLRTMAREQTPGEEWGGILRKWAEFWMKTSAMPRSRYSSLALACAMLNPRIASSPSKLRASSSTNISTTP LTLEQVFEYFMEMDEARELLTDISKLSPSELLFVVDVRLPRSEMDWARKKVRLTRKGWGGAYSMIRYRMDRAALGKDPYT NYTFQEILDEGGICMDQAYFAVNTAKCNGIPSAYVTGDGNRGPHAWVNLLTTDETWQSYGGYGYNTGHFSHPHNCKSKHE STLLQGMDKKVNGARLDTSLDYLSLADLFEEMQKPDCARVMLEAATQATPGSPLGWERLIALMGRPESGTKLEEWDELVA MIKRKFRSRPDYLAMAARVEDEYIFPMRDASTNKRHVARDLKKLEKETDEGRSDLTSAAIKRQADLLMENGDKAGVAALY RKSMKDYARRAEVFEALMGQYYEYVSQDQEAVLQMAKEAESSYNRYIRTKSGDYFKVKKEAAIQRRIAGYYEKGGNGKKA DSLRKDAEKREKNSKKGIREEN
Sequences:
>Translated_742_residues MNPVNPLRPGFPKHKKSSSGGIIITIVLVLALAAGGVAYHRVSVQRKAAAAELAARKEAEAKAARARKAAELEAARRKAE ERARAEAEEKARLEAERLAAEEAAGKRQNKEPEVAEPSPEEPKEEPVVQEEDPRLEIFKKPVLLVSLKANNAANRKLFTD AFNLALETGRYDLYADFLRSNLERDAVKVIKFGKFDASMYDQSPYLMRANELYQLISKVGAETIQEQIKESSPRYFYPWL FSDPSDPLRLFLRTMAREQTPGEEWGGILRKWAEFWMKTSAMPRSRYSSLALACAMLNPRIASSPSKLRASSSTNISTTP LTLEQVFEYFMEMDEARELLTDISKLSPSELLFVVDVRLPRSEMDWARKKVRLTRKGWGGAYSMIRYRMDRAALGKDPYT NYTFQEILDEGGICMDQAYFAVNTAKCNGIPSAYVTGDGNRGPHAWVNLLTTDETWQSYGGYGYNTGHFSHPHNCKSKHE STLLQGMDKKVNGARLDTSLDYLSLADLFEEMQKPDCARVMLEAATQATPGSPLGWERLIALMGRPESGTKLEEWDELVA MIKRKFRSRPDYLAMAARVEDEYIFPMRDASTNKRHVARDLKKLEKETDEGRSDLTSAAIKRQADLLMENGDKAGVAALY RKSMKDYARRAEVFEALMGQYYEYVSQDQEAVLQMAKEAESSYNRYIRTKSGDYFKVKKEAAIQRRIAGYYEKGGNGKKA DSLRKDAEKREKNSKKGIREEN >Mature_742_residues MNPVNPLRPGFPKHKKSSSGGIIITIVLVLALAAGGVAYHRVSVQRKAAAAELAARKEAEAKAARARKAAELEAARRKAE ERARAEAEEKARLEAERLAAEEAAGKRQNKEPEVAEPSPEEPKEEPVVQEEDPRLEIFKKPVLLVSLKANNAANRKLFTD AFNLALETGRYDLYADFLRSNLERDAVKVIKFGKFDASMYDQSPYLMRANELYQLISKVGAETIQEQIKESSPRYFYPWL FSDPSDPLRLFLRTMAREQTPGEEWGGILRKWAEFWMKTSAMPRSRYSSLALACAMLNPRIASSPSKLRASSSTNISTTP LTLEQVFEYFMEMDEARELLTDISKLSPSELLFVVDVRLPRSEMDWARKKVRLTRKGWGGAYSMIRYRMDRAALGKDPYT NYTFQEILDEGGICMDQAYFAVNTAKCNGIPSAYVTGDGNRGPHAWVNLLTTDETWQSYGGYGYNTGHFSHPHNCKSKHE STLLQGMDKKVNGARLDTSLDYLSLADLFEEMQKPDCARVMLEAATQATPGSPLGWERLIALMGRPESGTKLEEWDELVA MIKRKFRSRPDYLAMAARVEDEYIFPMRDASTNKRHVARDLKKLEKETDEGRSDLTSAAIKRQADLLMENGDKAGVAALY RKSMKDYARRAEVFEALMGQYYEYVSQDQEAVLQMAKEAESSYNRYIRTKSGDYFKVKKEAAIQRRIAGYYEKGGNGKKA DSLRKDAEKREKNSKKGIREEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83988; Mature: 83988
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVNPLRPGFPKHKKSSSGGIIITIVLVLALAAGGVAYHRVSVQRKAAAAELAARKEAE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AKAARARKAAELEAARRKAEERARAEAEEKARLEAERLAAEEAAGKRQNKEPEVAEPSPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EPKEEPVVQEEDPRLEIFKKPVLLVSLKANNAANRKLFTDAFNLALETGRYDLYADFLRS CCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC NLERDAVKVIKFGKFDASMYDQSPYLMRANELYQLISKVGAETIQEQIKESSPRYFYPWL CHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE FSDPSDPLRLFLRTMAREQTPGEEWGGILRKWAEFWMKTSAMPRSRYSSLALACAMLNPR CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH IASSPSKLRASSSTNISTTPLTLEQVFEYFMEMDEARELLTDISKLSPSELLFVVDVRLP HCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC RSEMDWARKKVRLTRKGWGGAYSMIRYRMDRAALGKDPYTNYTFQEILDEGGICMDQAYF CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEHHHHH AVNTAKCNGIPSAYVTGDGNRGPHAWVNLLTTDETWQSYGGYGYNTGHFSHPHNCKSKHE EEEEHCCCCCCCEEEECCCCCCCHHHEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHH STLLQGMDKKVNGARLDTSLDYLSLADLFEEMQKPDCARVMLEAATQATPGSPLGWERLI HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHH ALMGRPESGTKLEEWDELVAMIKRKFRSRPDYLAMAARVEDEYIFPMRDASTNKRHVARD HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHH LKKLEKETDEGRSDLTSAAIKRQADLLMENGDKAGVAALYRKSMKDYARRAEVFEALMGQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YYEYVSQDQEAVLQMAKEAESSYNRYIRTKSGDYFKVKKEAAIQRRIAGYYEKGGNGKKA HHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHH DSLRKDAEKREKNSKKGIREEN HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNPVNPLRPGFPKHKKSSSGGIIITIVLVLALAAGGVAYHRVSVQRKAAAAELAARKEAE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AKAARARKAAELEAARRKAEERARAEAEEKARLEAERLAAEEAAGKRQNKEPEVAEPSPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EPKEEPVVQEEDPRLEIFKKPVLLVSLKANNAANRKLFTDAFNLALETGRYDLYADFLRS CCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC NLERDAVKVIKFGKFDASMYDQSPYLMRANELYQLISKVGAETIQEQIKESSPRYFYPWL CHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE FSDPSDPLRLFLRTMAREQTPGEEWGGILRKWAEFWMKTSAMPRSRYSSLALACAMLNPR CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH IASSPSKLRASSSTNISTTPLTLEQVFEYFMEMDEARELLTDISKLSPSELLFVVDVRLP HCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC RSEMDWARKKVRLTRKGWGGAYSMIRYRMDRAALGKDPYTNYTFQEILDEGGICMDQAYF CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEHHHHH AVNTAKCNGIPSAYVTGDGNRGPHAWVNLLTTDETWQSYGGYGYNTGHFSHPHNCKSKHE EEEEHCCCCCCCEEEECCCCCCCHHHEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHH STLLQGMDKKVNGARLDTSLDYLSLADLFEEMQKPDCARVMLEAATQATPGSPLGWERLI HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHH ALMGRPESGTKLEEWDELVAMIKRKFRSRPDYLAMAARVEDEYIFPMRDASTNKRHVARD HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHH LKKLEKETDEGRSDLTSAAIKRQADLLMENGDKAGVAALYRKSMKDYARRAEVFEALMGQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YYEYVSQDQEAVLQMAKEAESSYNRYIRTKSGDYFKVKKEAAIQRRIAGYYEKGGNGKKA HHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHH DSLRKDAEKREKNSKKGIREEN HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA