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The map label for this gene is nrnA [H]

Identifier: 187735255

GI number: 187735255

Start: 884011

End: 885024

Strand: Reverse

Name: nrnA [H]

Synonym: Amuc_0750

Alternate gene names: 187735255

Gene position: 885024-884011 (Counterclockwise)

Preceding gene: 187735256

Following gene: 187735254

Centisome position: 33.22

GC content: 56.71

Gene sequence:

>1014_bases
ATGGAAGATTGGAAACATTATCCCCAATTCGCGCCTTTGGCGGATCTGATCCGCAGCCACGGCAGTTTTGCGGTAATTGC
GCATGTTCACCCGGACGGCGACGCTATCGGCTCCACGCTGGCTTTGGGGGAAGCCCTGAAGCAAATGGGAAAGAAGGTGG
TGATGATGAACGAGGACGGGGTGCCTTCCAATCTGGCCTTTATGCCGGGTGTGGAAAATATTATTCCCACGCCTGATGAG
CCGGTGGATGTGGAAGTAGCCATTTCCGTGGATAACGGCGCGCTCAAGAGGCTGGGAGAACGCAGCCTGGAGGCTTTGGC
GGGAGTGAAGGTGTGGGCGAACATCGACCACCATCGGACGAACGAGCTGTTTGGAGACGTTCAGTGCGTTTTGCCGGACG
AATGCGCCACGGGGGCGGTTTTATATTACTTTTTCAAGTATCTGGGCGTTCCCGTCACTCCGGTGATGCGAGACGCCCTT
TACGTGGCCGTCAGCACGGATACGGGGTCTTTCCAATATCAGATGACGACGGCGGCCGTCATGGAACTGGCTGCGGATTT
GATCCGGATGGGCGTTGACGTCCAGGACATCAACCGCCAGCTTTACCAGGAAAAGCCGTGGGTGAAAATGCAGTTGATGC
GTGAGGCGCTGAACGGAATGAAGCTGACGCCGGACGGCAGGATTTGCACGTTTTGCCTGACGAATGAGGCAAAAGCCCGG
ATTGGAAGCCGTCCGGAAGATACGGAAGGCCTGATTGATCTTCTGCGTTCCGTGCAGGGAGTCTGGCTGGCCGCTTATCT
GGAAGAAACGGAGGAAGATCCCCGCATCCGTATTTCCCTGAGATCCAAGACGCCTGAAATATCCGTCGCGGAGCTGGCCT
CCCGTTTCGGCGGAGGCGGCCATTCCATGGCCGCCGGAGTGCGTATCCGGGGGCCTATTGAAGAAGTGCGCCTTACTATC
CTGAAGGCCATGCGGGAAGAAGTGGAACGCGTGATCCGACAGAAAATTTCATGA

Upstream 100 bases:

>100_bases
GTCCAAGAAGTAATCCTCTTCCGGGATTAAGTACGACTTTTCAAGCCGCACTTGGTGATTGTCCAGGTGCGGCTTTTTCT
ATAAAAACACGGCAGTGCAT

Downstream 100 bases:

>100_bases
ATGTTTCAGATTCCATCCAGGTTCCTTCGGGCGTCCTGTTGATTGACAAGGCGCGGGACATGACTTCCCACGATGTGGTG
GCAATTGCGCGCCGTTCCCT

Product: phosphoesterase RecJ domain protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MEDWKHYPQFAPLADLIRSHGSFAVIAHVHPDGDAIGSTLALGEALKQMGKKVVMMNEDGVPSNLAFMPGVENIIPTPDE
PVDVEVAISVDNGALKRLGERSLEALAGVKVWANIDHHRTNELFGDVQCVLPDECATGAVLYYFFKYLGVPVTPVMRDAL
YVAVSTDTGSFQYQMTTAAVMELAADLIRMGVDVQDINRQLYQEKPWVKMQLMREALNGMKLTPDGRICTFCLTNEAKAR
IGSRPEDTEGLIDLLRSVQGVWLAAYLEETEEDPRIRISLRSKTPEISVAELASRFGGGGHSMAAGVRIRGPIEEVRLTI
LKAMREEVERVIRQKIS

Sequences:

>Translated_337_residues
MEDWKHYPQFAPLADLIRSHGSFAVIAHVHPDGDAIGSTLALGEALKQMGKKVVMMNEDGVPSNLAFMPGVENIIPTPDE
PVDVEVAISVDNGALKRLGERSLEALAGVKVWANIDHHRTNELFGDVQCVLPDECATGAVLYYFFKYLGVPVTPVMRDAL
YVAVSTDTGSFQYQMTTAAVMELAADLIRMGVDVQDINRQLYQEKPWVKMQLMREALNGMKLTPDGRICTFCLTNEAKAR
IGSRPEDTEGLIDLLRSVQGVWLAAYLEETEEDPRIRISLRSKTPEISVAELASRFGGGGHSMAAGVRIRGPIEEVRLTI
LKAMREEVERVIRQKIS
>Mature_337_residues
MEDWKHYPQFAPLADLIRSHGSFAVIAHVHPDGDAIGSTLALGEALKQMGKKVVMMNEDGVPSNLAFMPGVENIIPTPDE
PVDVEVAISVDNGALKRLGERSLEALAGVKVWANIDHHRTNELFGDVQCVLPDECATGAVLYYFFKYLGVPVTPVMRDAL
YVAVSTDTGSFQYQMTTAAVMELAADLIRMGVDVQDINRQLYQEKPWVKMQLMREALNGMKLTPDGRICTFCLTNEAKAR
IGSRPEDTEGLIDLLRSVQGVWLAAYLEETEEDPRIRISLRSKTPEISVAELASRFGGGGHSMAAGVRIRGPIEEVRLTI
LKAMREEVERVIRQKIS

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 37250; Mature: 37250

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDWKHYPQFAPLADLIRSHGSFAVIAHVHPDGDAIGSTLALGEALKQMGKKVVMMNEDG
CCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCC
VPSNLAFMPGVENIIPTPDEPVDVEVAISVDNGALKRLGERSLEALAGVKVWANIDHHRT
CCCCCEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCHHHH
NELFGDVQCVLPDECATGAVLYYFFKYLGVPVTPVMRDALYVAVSTDTGSFQYQMTTAAV
HHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCEEEEEEECCCCCEEEEHHHHHH
MELAADLIRMGVDVQDINRQLYQEKPWVKMQLMREALNGMKLTPDGRICTFCLTNEAKAR
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCEEEEEECCCHHHH
IGSRPEDTEGLIDLLRSVQGVWLAAYLEETEEDPRIRISLRSKTPEISVAELASRFGGGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCC
HSMAAGVRIRGPIEEVRLTILKAMREEVERVIRQKIS
CHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDWKHYPQFAPLADLIRSHGSFAVIAHVHPDGDAIGSTLALGEALKQMGKKVVMMNEDG
CCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCC
VPSNLAFMPGVENIIPTPDEPVDVEVAISVDNGALKRLGERSLEALAGVKVWANIDHHRT
CCCCCEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCHHHH
NELFGDVQCVLPDECATGAVLYYFFKYLGVPVTPVMRDALYVAVSTDTGSFQYQMTTAAV
HHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCEEEEEEECCCCCEEEEHHHHHH
MELAADLIRMGVDVQDINRQLYQEKPWVKMQLMREALNGMKLTPDGRICTFCLTNEAKAR
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCEEEEEECCCHHHH
IGSRPEDTEGLIDLLRSVQGVWLAAYLEETEEDPRIRISLRSKTPEISVAELASRFGGGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCC
HSMAAGVRIRGPIEEVRLTILKAMREEVERVIRQKIS
CHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]