| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is queA [H]
Identifier: 187735219
GI number: 187735219
Start: 842050
End: 843039
Strand: Reverse
Name: queA [H]
Synonym: Amuc_0713
Alternate gene names: 187735219
Gene position: 843039-842050 (Counterclockwise)
Preceding gene: 187735223
Following gene: 187735217
Centisome position: 31.64
GC content: 55.45
Gene sequence:
>990_bases ATGCACTTGGCCGTGCGCACCATTGATTTTGATTATCCGCTGCCGGAAGAACTGATAGCGGACCGTCCCCTTCCGGACCG CTCCGCGTCCCGGATGATGGTCATTCACCGGGATACGGGCATGATTGAGCACAGGCATTTTTGCGATTTGCCGGAATATG TGCGGGAAGGGGATCATTTTATCCTGAATGATACCAGGGTGGTTCCGGCAAGATATTTTTCCAACGACGGTTCCATTGAA ATAGTACGCGCGGAGGTTCTTAATCCCCTGTTGTGGAAGTGCATGGTGCGCCCCGGACGCAAAATGAAGCTTGGGCGTAC GGTTGCGGTCGGAGAGGCGGTGGGCACCGTGGAAGGCATTGATGAGGAAGGGTACCGCCTTATCCGGTTTGACCGGGAAG TGGATGAGGAAAAATACGGGCGTCTGGCTCTTCCCCACTATATGAACCGGGAAAGCGACCCATCCGACAGGGAGCGTTAC CAGACCGTTTACGCCAGGCATGAAGGGGCCATTGCCGCTCCTACGGCCGGGCTGCATTTTACGCCGGAGCTGCTGGCATC CGTCCCCCACGATTTTCTAACCCTGCACGTGGGGGTAGGAACATTCCGTCCCGTCAAGGCGGACAGGATAGAAGACCATC AGATGCATACGGAGCATTTTTTTCTTCCTGAAGCCGCTGCCCGGGCAGTCAATAACGCCAGAAGGGTTATTGCCGTGGGC ACCACCAGCGTGCGGGTGCTGGAACATGTGGCAACGGCGGAAGGTCTGCCGTTGAGGGAGTGTTCCGGTTCAACGAACAT CTTCATTTATCCTCCCTACAACTACAAGGTGGTGGACGCCCTGATCACGAATTTCCATTTGCCGCAGAGCACGCTGCTGA TGCTTGTCAGCGCCTTTGCGGGCAGGGAGCTGGTCATGAAAGCCTATCTGGAAGCCATCCGGGAACGGTACAGATTTTTC TCCTATGGAGACTGCATGTTGATTTTGTAA
Upstream 100 bases:
>100_bases GTTCATGTATCCTTCCATACCATATGAACCGAAGCAGGGTAAAGATATAATTGTGTTACCTGCGGTTTAAAGGTATTGAC CTTTCGGAGGATTCGTGGCA
Downstream 100 bases:
>100_bases GGTCCCGGCGGTTTTTTCAAGTATCCTTTGGAAAAAGCGCGGATGGTTTTAAAGACTGTCTTCCGGAGGGTGCTGCGGGC GGAGGGACGGCGGCGGAACG
Product: S-adenosylmethionine/tRNA-ribosyltransferase- isomerase
Products: NA
Alternate protein names: Queuosine biosynthesis protein queA [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MHLAVRTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTGMIEHRHFCDLPEYVREGDHFILNDTRVVPARYFSNDGSIE IVRAEVLNPLLWKCMVRPGRKMKLGRTVAVGEAVGTVEGIDEEGYRLIRFDREVDEEKYGRLALPHYMNRESDPSDRERY QTVYARHEGAIAAPTAGLHFTPELLASVPHDFLTLHVGVGTFRPVKADRIEDHQMHTEHFFLPEAAARAVNNARRVIAVG TTSVRVLEHVATAEGLPLRECSGSTNIFIYPPYNYKVVDALITNFHLPQSTLLMLVSAFAGRELVMKAYLEAIRERYRFF SYGDCMLIL
Sequences:
>Translated_329_residues MHLAVRTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTGMIEHRHFCDLPEYVREGDHFILNDTRVVPARYFSNDGSIE IVRAEVLNPLLWKCMVRPGRKMKLGRTVAVGEAVGTVEGIDEEGYRLIRFDREVDEEKYGRLALPHYMNRESDPSDRERY QTVYARHEGAIAAPTAGLHFTPELLASVPHDFLTLHVGVGTFRPVKADRIEDHQMHTEHFFLPEAAARAVNNARRVIAVG TTSVRVLEHVATAEGLPLRECSGSTNIFIYPPYNYKVVDALITNFHLPQSTLLMLVSAFAGRELVMKAYLEAIRERYRFF SYGDCMLIL >Mature_329_residues MHLAVRTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTGMIEHRHFCDLPEYVREGDHFILNDTRVVPARYFSNDGSIE IVRAEVLNPLLWKCMVRPGRKMKLGRTVAVGEAVGTVEGIDEEGYRLIRFDREVDEEKYGRLALPHYMNRESDPSDRERY QTVYARHEGAIAAPTAGLHFTPELLASVPHDFLTLHVGVGTFRPVKADRIEDHQMHTEHFFLPEAAARAVNNARRVIAVG TTSVRVLEHVATAEGLPLRECSGSTNIFIYPPYNYKVVDALITNFHLPQSTLLMLVSAFAGRELVMKAYLEAIRERYRFF SYGDCMLIL
Specific function: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) [H]
COG id: COG0809
COG function: function code J; S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queA family [H]
Homologues:
Organism=Escherichia coli, GI1786606, Length=345, Percent_Identity=44.6376811594203, Blast_Score=262, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003699 [H]
Pfam domain/function: PF02547 Queuosine_synth [H]
EC number: 5.-.-.- [C]
Molecular weight: Translated: 37567; Mature: 37567
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLAVRTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTGMIEHRHFCDLPEYVREGDHF CCEEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEE ILNDTRVVPARYFSNDGSIEIVRAEVLNPLLWKCMVRPGRKMKLGRTVAVGEAVGTVEGI EEECCEEEEHHEECCCCCEEEEHHHHCCHHHHHHHCCCCCCEECCCEEEECHHHHHHCCC DEEGYRLIRFDREVDEEKYGRLALPHYMNRESDPSDRERYQTVYARHEGAIAAPTAGLHF CCCCCEEEEECCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCC TPELLASVPHDFLTLHVGVGTFRPVKADRIEDHQMHTEHFFLPEAAARAVNNARRVIAVG CHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCHHHEECCHHHHHHHCCCCEEEEEC TTSVRVLEHVATAEGLPLRECSGSTNIFIYPPYNYKVVDALITNFHLPQSTLLMLVSAFA CHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHC GRELVMKAYLEAIRERYRFFSYGDCMLIL CHHHHHHHHHHHHHHHHHEEECCCEEEEC >Mature Secondary Structure MHLAVRTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTGMIEHRHFCDLPEYVREGDHF CCEEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEE ILNDTRVVPARYFSNDGSIEIVRAEVLNPLLWKCMVRPGRKMKLGRTVAVGEAVGTVEGI EEECCEEEEHHEECCCCCEEEEHHHHCCHHHHHHHCCCCCCEECCCEEEECHHHHHHCCC DEEGYRLIRFDREVDEEKYGRLALPHYMNRESDPSDRERYQTVYARHEGAIAAPTAGLHF CCCCCEEEEECCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCC TPELLASVPHDFLTLHVGVGTFRPVKADRIEDHQMHTEHFFLPEAAARAVNNARRVIAVG CHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCHHHEECCHHHHHHHCCCCEEEEEC TTSVRVLEHVATAEGLPLRECSGSTNIFIYPPYNYKVVDALITNFHLPQSTLLMLVSAFA CHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHC GRELVMKAYLEAIRERYRFFSYGDCMLIL CHHHHHHHHHHHHHHHHHEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Isomerases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA