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The map label for this gene is yebC [C]

Identifier: 187735215

GI number: 187735215

Start: 836235

End: 836990

Strand: Reverse

Name: yebC [C]

Synonym: Amuc_0709

Alternate gene names: 187735215

Gene position: 836990-836235 (Counterclockwise)

Preceding gene: 187735217

Following gene: 187735214

Centisome position: 31.42

GC content: 55.29

Gene sequence:

>756_bases
ATGTCAGGACATAATAAATGGTCTAAGATCAAGTACGTTAAGGCTAAGGAAGACGCCAAGAAGGGCAAGGTTTTTGCCCG
CTTTGCCCATGAAATCATGCTGGCCGCCAAAAGCGGCGGCGGAGATCCTGATCTGAATCCGCGCCTGCGCGCCGCCATTG
ACGGAGCCAAGGCCGTGTCCACCCCCAAGGAAAATATTGAACGCGCCATCAAAAAAGGCACCGGGGAACTGGGAGGAGCT
ACCATCCAGGAGATTACCTATGAAGGCTACGGCCCCTCAGGCACGGCTTTCCTGATTGAAGTGGCGACGGACAACACAAA
CCGTTCCGCTTCCGAGCTGCGTACCCTGTTCACCAAAAACGGAGGCAGCATCGGTACGCCCGGTTCCGTGGCTTACCAGT
TTGAACGCAAGGGAGAGGCCCGCATCATGGCGGAAGGTCTTACGGAGGATTCCGCCATGGATCTGGCGCTGGAATGCGGC
GCGGATGATGTGGAACAGGGGGATTCCGACAATGAATGGGTGTTTGTTACGAGCCCAACGGAGTTGAACAACGTGTGCGC
CGCCCTGCGTGAAGCCGGACATACGGTAATTTCCATGAAGCTGATTTCCGTGGCGCAGAATGCTTCCGTGATTAATGATC
TGGAAACGGCAAAGGCCGCCCTGCGCCTGTATGAAGCGCTGGACGACTATGATGACGCGCTGAACGTCTTCTCCAATTTC
GATGTGGCGGAAGAAATCCTTGAGCAGCTTGGTTAA

Upstream 100 bases:

>100_bases
GCGTGGTATTTGCAAATGACAATGTGTTCCCCGGGTTGCAGAACAGTTCCACTTGTTAGTTTGTCTCTTTTCACCTACAC
TTACTATTATTCCCAATTCT

Downstream 100 bases:

>100_bases
CGCTGTTGTCCTTCAGGAGACGCCTGTTGTTGCAGTTCAATTTTCTTTTCCATGTCTGATACCCCCCCAGATTTGACTCC
GGAACAGGTTTCTCCGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHNKWSKIKYVKAKEDAKKGKVFARFAHEIMLAAKSGGGDPDLNPRLRAAIDGAKAVSTPKENIERAIKKGTGELGGA
TIQEITYEGYGPSGTAFLIEVATDNTNRSASELRTLFTKNGGSIGTPGSVAYQFERKGEARIMAEGLTEDSAMDLALECG
ADDVEQGDSDNEWVFVTSPTELNNVCAALREAGHTVISMKLISVAQNASVINDLETAKAALRLYEALDDYDDALNVFSNF
DVAEEILEQLG

Sequences:

>Translated_251_residues
MSGHNKWSKIKYVKAKEDAKKGKVFARFAHEIMLAAKSGGGDPDLNPRLRAAIDGAKAVSTPKENIERAIKKGTGELGGA
TIQEITYEGYGPSGTAFLIEVATDNTNRSASELRTLFTKNGGSIGTPGSVAYQFERKGEARIMAEGLTEDSAMDLALECG
ADDVEQGDSDNEWVFVTSPTELNNVCAALREAGHTVISMKLISVAQNASVINDLETAKAALRLYEALDDYDDALNVFSNF
DVAEEILEQLG
>Mature_250_residues
SGHNKWSKIKYVKAKEDAKKGKVFARFAHEIMLAAKSGGGDPDLNPRLRAAIDGAKAVSTPKENIERAIKKGTGELGGAT
IQEITYEGYGPSGTAFLIEVATDNTNRSASELRTLFTKNGGSIGTPGSVAYQFERKGEARIMAEGLTEDSAMDLALECGA
DDVEQGDSDNEWVFVTSPTELNNVCAALREAGHTVISMKLISVAQNASVINDLETAKAALRLYEALDDYDDALNVFSNFD
VAEEILEQLG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=26.6129032258064, Blast_Score=118, Evalue=6e-27,
Organism=Escherichia coli, GI1788171, Length=250, Percent_Identity=42.8, Blast_Score=188, Evalue=2e-49,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=36.2869198312236, Blast_Score=136, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=32.3308270676692, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24583305, Length=204, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y709_AKKM8 (B2UQ11)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001877327.1
- ProteinModelPortal:   B2UQ11
- SMR:   B2UQ11
- GeneID:   6273882
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_0709
- HOGENOM:   HBG715231
- OMA:   GCVAYLF
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26926; Mature: 26795

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHNKWSKIKYVKAKEDAKKGKVFARFAHEIMLAAKSGGGDPDLNPRLRAAIDGAKAVS
CCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHCC
TPKENIERAIKKGTGELGGATIQEITYEGYGPSGTAFLIEVATDNTNRSASELRTLFTKN
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCC
GGSIGTPGSVAYQFERKGEARIMAEGLTEDSAMDLALECGADDVEQGDSDNEWVFVTSPT
CCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHEECCCCHHHCCCCCCCEEEEECCH
ELNNVCAALREAGHTVISMKLISVAQNASVINDLETAKAALRLYEALDDYDDALNVFSNF
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DVAEEILEQLG
CHHHHHHHHCC
>Mature Secondary Structure 
SGHNKWSKIKYVKAKEDAKKGKVFARFAHEIMLAAKSGGGDPDLNPRLRAAIDGAKAVS
CCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHCC
TPKENIERAIKKGTGELGGATIQEITYEGYGPSGTAFLIEVATDNTNRSASELRTLFTKN
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCC
GGSIGTPGSVAYQFERKGEARIMAEGLTEDSAMDLALECGADDVEQGDSDNEWVFVTSPT
CCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHEECCCCHHHCCCCCCCEEEEECCH
ELNNVCAALREAGHTVISMKLISVAQNASVINDLETAKAALRLYEALDDYDDALNVFSNF
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DVAEEILEQLG
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA