Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yeiH [C]
Identifier: 187735208
GI number: 187735208
Start: 826477
End: 827499
Strand: Direct
Name: yeiH [C]
Synonym: Amuc_0702
Alternate gene names: 187735208
Gene position: 826477-827499 (Clockwise)
Preceding gene: 187735207
Following gene: 187735209
Centisome position: 31.02
GC content: 55.72
Gene sequence:
>1023_bases ATGTCTCCCAAACATCTAGCCAATCCCCTCCACGGCATCCTGCTTATTGTTCTGTTTTCCTTTTCCGCTTTTTACATTGC TGATTTTGAATGGGTGAAACATCTTTCCCTCAGCCCGCTGATCGTCGGCATCGTGCTGGGAATGCTTTACGCCAACAGCC TGCGCAACCACCTTCCGGAAACATGGGTTCCCGGCATTCAGTTCTGCACCAAGCAGGTTTTGAGAACAGGCATTGTCCTG TACGGATTCAAACTGACTTTTCAAAGTGTCATCGACATCGGCGGCTCCGCCCTGGCGCTCGACCTTATTGTGGTCACTCT CACCATTCTTCTGGGAGCCGGGCTGGGGCGCCTGCTGAAAATGGACAGGGACACGGCCCTGCTGACCTCCATCGGCAGTT CCATTTGCGGGGCAGCAGCCGTTCTGGGGGCGGAACCCGTCGTCAAAAGCAAACCTTACAAAGCCGCTGTGGCCGTTTCC ACCGTGGTCATCTTCGGCACGCTCTCCATGTTTCTGTATCCAGCCCTGCACCGGGCCGGAATACTGGATCTGACGCCGGA ACAAATGGGGCTTTTTACCGGAGCCACCCTTCATGAAGTGGCGCATGTGGTGGGCGCCGGCAACGCCATGGGGCAAGCTA TTTCCGATCCGGCCATTATCGTCAAAATGATCCGGGTAATGATGCTGGCCCCGGTGCTGGTCGTCCTGAGCATTGTCCTG GCCCGGAGGGACCCCTCTTCCGGAGCAAACGGGGAAAAACGGAAAATTACCATTCCCTGGTTCGCCTTCCTGTTCCTTGC CGTCATTGGCTTTAATTCCCTGCACCTGCTGCCTGCCGGACTTGTGGACGCCATAAACACCCTGGATACATTCCTGCTGA CCATGGCGATGACGGCCCTGGGCGCGGAATCCAGCTTTGAGAAGTTTAAAAAAGCCGGAGCGCGGCCTTTCCTGCTTGCA GGCTTCCTGTATATCTGGCTTTTCTTCGGAGGTTACTGGCTGGTCAAGCTGATCAGCCTCTAA
Upstream 100 bases:
>100_bases AATTAGATTTTATAATGGCTGCATCGTATATTATTCCGCAGCCAATTCGGTACGCTCCCGGCCAGATACAACGGGCAGCC GCAACCATCATTTACCGACC
Downstream 100 bases:
>100_bases ATTCTAAAAACATTCCTCCTGCGGAAAGAGGGCAAGGCCTACGCCCTGCCTTTCCGAACAGGAGAAAAAAGCCGTTTCAC CGGCAGAACGTGAGAACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSPKHLANPLHGILLIVLFSFSAFYIADFEWVKHLSLSPLIVGIVLGMLYANSLRNHLPETWVPGIQFCTKQVLRTGIVL YGFKLTFQSVIDIGGSALALDLIVVTLTILLGAGLGRLLKMDRDTALLTSIGSSICGAAAVLGAEPVVKSKPYKAAVAVS TVVIFGTLSMFLYPALHRAGILDLTPEQMGLFTGATLHEVAHVVGAGNAMGQAISDPAIIVKMIRVMMLAPVLVVLSIVL ARRDPSSGANGEKRKITIPWFAFLFLAVIGFNSLHLLPAGLVDAINTLDTFLLTMAMTALGAESSFEKFKKAGARPFLLA GFLYIWLFFGGYWLVKLISL
Sequences:
>Translated_340_residues MSPKHLANPLHGILLIVLFSFSAFYIADFEWVKHLSLSPLIVGIVLGMLYANSLRNHLPETWVPGIQFCTKQVLRTGIVL YGFKLTFQSVIDIGGSALALDLIVVTLTILLGAGLGRLLKMDRDTALLTSIGSSICGAAAVLGAEPVVKSKPYKAAVAVS TVVIFGTLSMFLYPALHRAGILDLTPEQMGLFTGATLHEVAHVVGAGNAMGQAISDPAIIVKMIRVMMLAPVLVVLSIVL ARRDPSSGANGEKRKITIPWFAFLFLAVIGFNSLHLLPAGLVDAINTLDTFLLTMAMTALGAESSFEKFKKAGARPFLLA GFLYIWLFFGGYWLVKLISL >Mature_339_residues SPKHLANPLHGILLIVLFSFSAFYIADFEWVKHLSLSPLIVGIVLGMLYANSLRNHLPETWVPGIQFCTKQVLRTGIVLY GFKLTFQSVIDIGGSALALDLIVVTLTILLGAGLGRLLKMDRDTALLTSIGSSICGAAAVLGAEPVVKSKPYKAAVAVST VVIFGTLSMFLYPALHRAGILDLTPEQMGLFTGATLHEVAHVVGAGNAMGQAISDPAIIVKMIRVMMLAPVLVVLSIVLA RRDPSSGANGEKRKITIPWFAFLFLAVIGFNSLHLLPAGLVDAINTLDTFLLTMAMTALGAESSFEKFKKAGARPFLLAG FLYIWLFFGGYWLVKLISL
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=296, Percent_Identity=49.3243243243243, Blast_Score=256, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004630 - InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36540; Mature: 36409
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKHLANPLHGILLIVLFSFSAFYIADFEWVKHLSLSPLIVGIVLGMLYANSLRNHLPE CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TWVPGIQFCTKQVLRTGIVLYGFKLTFQSVIDIGGSALALDLIVVTLTILLGAGLGRLLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHH MDRDTALLTSIGSSICGAAAVLGAEPVVKSKPYKAAVAVSTVVIFGTLSMFLYPALHRAG HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ILDLTPEQMGLFTGATLHEVAHVVGAGNAMGQAISDPAIIVKMIRVMMLAPVLVVLSIVL CCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ARRDPSSGANGEKRKITIPWFAFLFLAVIGFNSLHLLPAGLVDAINTLDTFLLTMAMTAL HCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAESSFEKFKKAGARPFLLAGFLYIWLFFGGYWLVKLISL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPKHLANPLHGILLIVLFSFSAFYIADFEWVKHLSLSPLIVGIVLGMLYANSLRNHLPE CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TWVPGIQFCTKQVLRTGIVLYGFKLTFQSVIDIGGSALALDLIVVTLTILLGAGLGRLLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHH MDRDTALLTSIGSSICGAAAVLGAEPVVKSKPYKAAVAVSTVVIFGTLSMFLYPALHRAG HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ILDLTPEQMGLFTGATLHEVAHVVGAGNAMGQAISDPAIIVKMIRVMMLAPVLVVLSIVL CCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ARRDPSSGANGEKRKITIPWFAFLFLAVIGFNSLHLLPAGLVDAINTLDTFLLTMAMTAL HCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAESSFEKFKKAGARPFLLAGFLYIWLFFGGYWLVKLISL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]