Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735209
Identifier: 187735209
GI number: 187735209
Start: 827881
End: 828954
Strand: Direct
Name: 187735209
Synonym: Amuc_0703
Alternate gene names: NA
Gene position: 827881-828954 (Clockwise)
Preceding gene: 187735208
Following gene: 187735210
Centisome position: 31.08
GC content: 57.64
Gene sequence:
>1074_bases ATGGCAACCAAATTATTCATTCCCGGACCCACTGAAGTAGCACCTGAAGTACTTGCCGCCATGAGCGGCCCAATGATGGG ACACCGATCCAAAGCGGCCTCCGCCCTGCAGCGCCGCATTTCCAACAATCTGCGCCGCATCCTGCTGACGGAACAGGAAA TTCTGCTTTCCACTTCCTCCGGTACGGGCCTGATGGAAGGCGCCGTGCGTTCCTGCACCGCCAAACGCGCCGCCATTTTT TCCGTGGGCGCCTTCGGCGACAAATGGTACAAGATCGCTACGGGCAACGGCGTGCCCTCCGATATTTTCAAGAGCGAACT GGGGCAGCCCACTACCCCGGAAATGGTGGACGCCGCCCTCTCCACCGGCAAATACGACACCATTTGCATCACGCACAATG AGACGTCCACCGGCATCCAGAACCCGGTGGAGGAAATTGCGGAAGTGCTTAAAAAATACCCGGATGTCGTGTGGTGCATG GACGCCGTGAGTTCCGCCGCCGGCTCCCGGATTGAAACGGACAAGCTGGGCGTGGACGTACTGGTGACCTCCACCCAGAA GGCGCTTGCCCTGCCTCCCGGCATGGCTGTCTGCACGCTATCCCAAAAAGCGTACGAACGCACCGCCTCCGTTCCCAACC GCGGCTGCTACTTTGACCTGCGTTCCATTTACGACACCATCCAGAAGAAGGACTACCAGTACACGAACACTCCCTGCATC TCCATCATGTACGCCATGGACCTCCAGCTCCAGCGCATCATGCAGGAAGGTGTGGAAAACCGCTTTGCGCGTCATGAAGC CATGGCCGAATTCGTGCGTTCCTGGGCGGATGAATATTTCAGCGTCTTTGCCAACCGGGACCACCTTTCCTGCACCCTGA CGGTGATCAGCAACACGAGGGACATTGACATCGCCTCCCTGAACAACTCCCTGATCGAACGCGGCATGCAGCTCGGCAAC GGTTACGGGGACTTGAAGAACAAAACGTTCCGCATTGCCCACATGGGCGAGCTGACGATGAATGACATGCGCTCCATCAC GTCCAGCATCGTGGATATCCTGAAGCTCAAATAA
Upstream 100 bases:
>100_bases CTCCGCTACTGCGGCAGGTTTTCCCGGTAAGGCTCAATAAAAATTCATAGTCAAACCGTTTGGAGACGCTATAGTATGCG TACCCAGTTCTTAAAAACAA
Downstream 100 bases:
>100_bases GCGAGGCCCCTGCCCTCTTTTCCGGCTCCGTCCGGAAAAGAGGGCGGAACGCCTCCGCCGGAACATGAACGGAACAATCG CCGGGAACAGGATACATCGC
Product: Alanine--glyoxylate transaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MATKLFIPGPTEVAPEVLAAMSGPMMGHRSKAASALQRRISNNLRRILLTEQEILLSTSSGTGLMEGAVRSCTAKRAAIF SVGAFGDKWYKIATGNGVPSDIFKSELGQPTTPEMVDAALSTGKYDTICITHNETSTGIQNPVEEIAEVLKKYPDVVWCM DAVSSAAGSRIETDKLGVDVLVTSTQKALALPPGMAVCTLSQKAYERTASVPNRGCYFDLRSIYDTIQKKDYQYTNTPCI SIMYAMDLQLQRIMQEGVENRFARHEAMAEFVRSWADEYFSVFANRDHLSCTLTVISNTRDIDIASLNNSLIERGMQLGN GYGDLKNKTFRIAHMGELTMNDMRSITSSIVDILKLK
Sequences:
>Translated_357_residues MATKLFIPGPTEVAPEVLAAMSGPMMGHRSKAASALQRRISNNLRRILLTEQEILLSTSSGTGLMEGAVRSCTAKRAAIF SVGAFGDKWYKIATGNGVPSDIFKSELGQPTTPEMVDAALSTGKYDTICITHNETSTGIQNPVEEIAEVLKKYPDVVWCM DAVSSAAGSRIETDKLGVDVLVTSTQKALALPPGMAVCTLSQKAYERTASVPNRGCYFDLRSIYDTIQKKDYQYTNTPCI SIMYAMDLQLQRIMQEGVENRFARHEAMAEFVRSWADEYFSVFANRDHLSCTLTVISNTRDIDIASLNNSLIERGMQLGN GYGDLKNKTFRIAHMGELTMNDMRSITSSIVDILKLK >Mature_356_residues ATKLFIPGPTEVAPEVLAAMSGPMMGHRSKAASALQRRISNNLRRILLTEQEILLSTSSGTGLMEGAVRSCTAKRAAIFS VGAFGDKWYKIATGNGVPSDIFKSELGQPTTPEMVDAALSTGKYDTICITHNETSTGIQNPVEEIAEVLKKYPDVVWCMD AVSSAAGSRIETDKLGVDVLVTSTQKALALPPGMAVCTLSQKAYERTASVPNRGCYFDLRSIYDTIQKKDYQYTNTPCIS IMYAMDLQLQRIMQEGVENRFARHEAMAEFVRSWADEYFSVFANRDHLSCTLTVISNTRDIDIASLNNSLIERGMQLGNG YGDLKNKTFRIAHMGELTMNDMRSITSSIVDILKLK
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=345, Percent_Identity=25.2173913043478, Blast_Score=99, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17536281, Length=366, Percent_Identity=23.4972677595628, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321079, Length=380, Percent_Identity=24.2105263157895, Blast_Score=110, Evalue=4e-25, Organism=Drosophila melanogaster, GI17530823, Length=344, Percent_Identity=23.2558139534884, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 39285; Mature: 39153
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKLFIPGPTEVAPEVLAAMSGPMMGHRSKAASALQRRISNNLRRILLTEQEILLSTSS CCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEECHHHEEECCC GTGLMEGAVRSCTAKRAAIFSVGAFGDKWYKIATGNGVPSDIFKSELGQPTTPEMVDAAL CCCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHH STGKYDTICITHNETSTGIQNPVEEIAEVLKKYPDVVWCMDAVSSAAGSRIETDKLGVDV HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCEEE LVTSTQKALALPPGMAVCTLSQKAYERTASVPNRGCYFDLRSIYDTIQKKDYQYTNTPCI EEECCCHHHCCCCCCEEEECCHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHH SIMYAMDLQLQRIMQEGVENRFARHEAMAEFVRSWADEYFSVFANRDHLSCTLTVISNTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC DIDIASLNNSLIERGMQLGNGYGDLKNKTFRIAHMGELTMNDMRSITSSIVDILKLK CEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATKLFIPGPTEVAPEVLAAMSGPMMGHRSKAASALQRRISNNLRRILLTEQEILLSTSS CCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEECHHHEEECCC GTGLMEGAVRSCTAKRAAIFSVGAFGDKWYKIATGNGVPSDIFKSELGQPTTPEMVDAAL CCCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHH STGKYDTICITHNETSTGIQNPVEEIAEVLKKYPDVVWCMDAVSSAAGSRIETDKLGVDV HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCEEE LVTSTQKALALPPGMAVCTLSQKAYERTASVPNRGCYFDLRSIYDTIQKKDYQYTNTPCI EEECCCHHHCCCCCCEEEECCHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHH SIMYAMDLQLQRIMQEGVENRFARHEAMAEFVRSWADEYFSVFANRDHLSCTLTVISNTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC DIDIASLNNSLIERGMQLGNGYGDLKNKTFRIAHMGELTMNDMRSITSSIVDILKLK CEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]