Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735203
Identifier: 187735203
GI number: 187735203
Start: 822100
End: 823245
Strand: Direct
Name: 187735203
Synonym: Amuc_0697
Alternate gene names: NA
Gene position: 822100-823245 (Clockwise)
Preceding gene: 187735202
Following gene: 187735204
Centisome position: 30.86
GC content: 54.54
Gene sequence:
>1146_bases ATGATAAATACCATGAAATCGCTTTTGGCGCTCTGCCTGTTTTACAGTGCGGCTTCCGTCTCCACCGCAGAAACCCCAAT TAAACATACTTCCTTCAGACCCGGAGAAATCTGGACGGACAACAACGGCGCGCACATCAACGCCCACGGCGGCGGCATCC TGTACGACAAGGGAACCTATTACTGGTACGGGGAACACAAGGTGGAGGGGGACGCGGGAAACTATGCCCAGGTGGGGGTT CACTGCTATTCCTCCAAAGACCTCTATAACTGGAAGGACGAAGGAATCGCCCTGAAGGTGGTGGAGGGGGACCATTCCCA CCCCATCGCCAGGGGCTGCATCCTGGAACGCCCCAAAGTGGTTTACAACAAAAAGACCGGAAAGTACGTGATGTGGTTCC ACCTGGAACTCAAGGGGAAAGGATATGGATCCGCTTACGCGGGGGTGGCAACGGCAGCAAAACCCACAGGGCCATTTAAG TTCCTGAAGGCCGGGCGAGTCAATCCGGGCAAATGGCCCCTGAACATGGATAAAAAGGACCAAACCATGGAGACATTCAA AGGGGTACCCGGCCTGACTTCCAGCGCACTGCCCGAAGGCGTACGTTCCGAGGATATGTTCAAGAAGGATTTTGAAAAAG GACAGATGAGCCGGGACATGACCATTTTTGTGGATGACGACGGCAAGGCCTACCACATTTATTCTTCTGAAGAAAATAGC ACAACACACATTGCGGAGCTGACACCGGATTACACGGGGCATACGGGAAAATTCGTCCGGGCATTTCCCGGACGCTTCAT GGAAGCTCCCGCCATCTTCAAACATAAAGGCAAATACTATTTCATCGCCTCCGGATGCACGGGCTGGGCTCCCAACGCCG CCCGCAGCGCCGTGGCCAAAAACATCGCCGGCCCATGGATGGAATTGAAAAATCCCTGCGTGGGGCCCAAGGCAGGCATC ACGTTCGGCGGCCAGAGCACTTTCATCCTGCCCGTGCAGGGCAAGCCCGGAAAATTCATCTTCATGGCGGACATCTGGCG ACCGCAAAATGCCATTGACGGCCGCTATATGTGGCTTCCCATCCAGTTTGACGGAGACCAGATCAAACTGGAATGGAAGG ACGAATGGACGCTGAAAGACATGTAG
Upstream 100 bases:
>100_bases ACGGCACCGGATATGCCCTGTACGCTCTTTCCCGCGCCTGGGACAAGCTGTACGGCCAACCGGAACCTTCTCCATCCTCT ATTTCCACACTATCCCGGCC
Downstream 100 bases:
>100_bases TACGTTTACCTCCAATACATATGAAAATATTAACAGCCATCCTTTCCGCTAATCTGGCATGCTGCCTTTTCTCCGTTGCC GCAGCAGAAACCCCAATTAA
Product: beta-glucanase precursor
Products: NA
Alternate protein names: Beta-Xylosidase; Glycoside Hydrolase Family; Ricin B Lectin; Licheninase; Glycosyl Hydrolase Family; Family; Coagulation Factor 5/8 Type Domain Protein; Ricin-Type Beta-Trefoil Lectin Domain Protein; Beta-Galactosidase; S-Layer Domain Protein; Glycoside Hydrolase Family Beta-Glycosidase; Xylosidase/Arabinofuranosidase; Cna B Domain Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MINTMKSLLALCLFYSAASVSTAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYYWYGEHKVEGDAGNYAQVGV HCYSSKDLYNWKDEGIALKVVEGDHSHPIARGCILERPKVVYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFK FLKAGRVNPGKWPLNMDKKDQTMETFKGVPGLTSSALPEGVRSEDMFKKDFEKGQMSRDMTIFVDDDGKAYHIYSSEENS TTHIAELTPDYTGHTGKFVRAFPGRFMEAPAIFKHKGKYYFIASGCTGWAPNAARSAVAKNIAGPWMELKNPCVGPKAGI TFGGQSTFILPVQGKPGKFIFMADIWRPQNAIDGRYMWLPIQFDGDQIKLEWKDEWTLKDM
Sequences:
>Translated_381_residues MINTMKSLLALCLFYSAASVSTAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYYWYGEHKVEGDAGNYAQVGV HCYSSKDLYNWKDEGIALKVVEGDHSHPIARGCILERPKVVYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFK FLKAGRVNPGKWPLNMDKKDQTMETFKGVPGLTSSALPEGVRSEDMFKKDFEKGQMSRDMTIFVDDDGKAYHIYSSEENS TTHIAELTPDYTGHTGKFVRAFPGRFMEAPAIFKHKGKYYFIASGCTGWAPNAARSAVAKNIAGPWMELKNPCVGPKAGI TFGGQSTFILPVQGKPGKFIFMADIWRPQNAIDGRYMWLPIQFDGDQIKLEWKDEWTLKDM >Mature_381_residues MINTMKSLLALCLFYSAASVSTAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYYWYGEHKVEGDAGNYAQVGV HCYSSKDLYNWKDEGIALKVVEGDHSHPIARGCILERPKVVYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFK FLKAGRVNPGKWPLNMDKKDQTMETFKGVPGLTSSALPEGVRSEDMFKKDFEKGQMSRDMTIFVDDDGKAYHIYSSEENS TTHIAELTPDYTGHTGKFVRAFPGRFMEAPAIFKHKGKYYFIASGCTGWAPNAARSAVAKNIAGPWMELKNPCVGPKAGI TFGGQSTFILPVQGKPGKFIFMADIWRPQNAIDGRYMWLPIQFDGDQIKLEWKDEWTLKDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42448; Mature: 42448
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINTMKSLLALCLFYSAASVSTAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTY CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCEE YWYGEHKVEGDAGNYAQVGVHCYSSKDLYNWKDEGIALKVVEGDHSHPIARGCILERPKV EEEECEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHCEECCCCEE VYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKFLKAGRVNPGKWPLNMDKKD EEECCCCCEEEEEEEEEECCCCCCHHCCCEECCCCCCCHHHHHCCCCCCCCCCCCCCCCH QTMETFKGVPGLTSSALPEGVRSEDMFKKDFEKGQMSRDMTIFVDDDGKAYHIYSSEENS HHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCC TTHIAELTPDYTGHTGKFVRAFPGRFMEAPAIFKHKGKYYFIASGCTGWAPNAARSAVAK EEEEEEECCCCCCCCCCEEEECCCCCCCCCHHEEECCCEEEEECCCCCCCCHHHHHHHHH NIAGPWMELKNPCVGPKAGITFGGQSTFILPVQGKPGKFIFMADIWRPQNAIDGRYMWLP HCCCCHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEE IQFDGDQIKLEWKDEWTLKDM EEECCCEEEEEECCCEEECCC >Mature Secondary Structure MINTMKSLLALCLFYSAASVSTAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTY CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCEE YWYGEHKVEGDAGNYAQVGVHCYSSKDLYNWKDEGIALKVVEGDHSHPIARGCILERPKV EEEECEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHCEECCCCEE VYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKFLKAGRVNPGKWPLNMDKKD EEECCCCCEEEEEEEEEECCCCCCHHCCCEECCCCCCCHHHHHCCCCCCCCCCCCCCCCH QTMETFKGVPGLTSSALPEGVRSEDMFKKDFEKGQMSRDMTIFVDDDGKAYHIYSSEENS HHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCC TTHIAELTPDYTGHTGKFVRAFPGRFMEAPAIFKHKGKYYFIASGCTGWAPNAARSAVAK EEEEEEECCCCCCCCCCEEEECCCCCCCCCHHEEECCCEEEEECCCCCCCCHHHHHHHHH NIAGPWMELKNPCVGPKAGITFGGQSTFILPVQGKPGKFIFMADIWRPQNAIDGRYMWLP HCCCCHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEE IQFDGDQIKLEWKDEWTLKDM EEECCCEEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA