Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735204
Identifier: 187735204
GI number: 187735204
Start: 823266
End: 824375
Strand: Direct
Name: 187735204
Synonym: Amuc_0698
Alternate gene names: NA
Gene position: 823266-824375 (Clockwise)
Preceding gene: 187735203
Following gene: 187735205
Centisome position: 30.9
GC content: 55.32
Gene sequence:
>1110_bases ATGAAAATATTAACAGCCATCCTTTCCGCTAATCTGGCATGCTGCCTTTTCTCCGTTGCCGCAGCAGAAACCCCAATTAA ACACACCTCCTTCAGACCCGGGGAAATCTGGACGGACAACAACGGCGCGCACATCAACGCCCACGGCGGCGGCATCCTGT ACGACAAGGGAACCTATTACTGGTACGGGGAACACAAGGTGGAGGGGGACGCGGGAAACTATGCCCAGGTGGGGGTTCAC TGCTATTCCTCCAAAGACCTCTATAACTGGAAGGACGAAGGAATCGCCCTGAAGGTGGTGGAGGGGGACCATTCCCACCC CATCGCCAAGGGCTGCATCCTGGAACGCCCCAAAGTGGTTTACAACAAAAAGACCGGAAAGTACGTGATGTGGTTCCACC TGGAACTCAAGGGGAAAGGATATGGATCCGCTTACGCGGGGGTGGCAACGGCAGCAAAACCCACAGGGCCATTCAAGTTC CTGAAAGCCGGGCGAGTCAACCCGGGCAAATGGCCCCTGAACATGGATAAAAAGGATCAGACGACCGAATTCACCAAGGA AATGCCCGACTACGTCCGCATCATCCGCAGGGACTATCCCGGCGGGCAGATGAGCCGGGACATGACCATTTTTGTGGACG ACAATGGAAAAGCCTACCACATCTATTCCTCGGAAGGCAATATCACCCTTCACATCGCGGAGCTGACGCCGGATTACACG GGGCATACGGGAAAATATGTCCGGGCGTTCATCAACCGTTACATGGAAGCTCCTGCTATTTGCAAACACAAGGGCAAATA CTATCTTATCGCTTCCGGATGCACGGGCTGGGCTCCCAACGCCGCCCGCAGCGCCGTGGCCAAAAACATCGCCGGCCCAT GGATGGAATTGAAAAATCCCTGCGTGGGGCCCAAGGCAGGCATCACGTTCGGCGGCCAGAGCACTTTCATCCTGCCTGTA CAGGGCAAACCCGGAAAATTCATCTTCATGGCGGACATCTGGCGGCCCAAAAACGCCATTGACGGCCGTTACCTGTGGCT GCCCATGAAATGGGAGGGTGACCAGATTATCCTGGAATGGAAGGATGAATGGACGCTGGATGACCTGTAA
Upstream 100 bases:
>100_bases ATATGTGGCTTCCCATCCAGTTTGACGGAGACCAGATCAAACTGGAATGGAAGGACGAATGGACGCTGAAAGACATGTAG TACGTTTACCTCCAATACAT
Downstream 100 bases:
>100_bases ATTTATCTCCTTCCTTTTTATGCAGGATACGGTTTATTGCTTCCATCTCCTTGCCGGAAGGCAGAAGCGGAGCCTTCTGT ATGCCTTGTGCTCCGCTCTC
Product: beta-glucanase precursor
Products: NA
Alternate protein names: Beta-Xylosidase; Glycoside Hydrolase Family; Ricin B Lectin; Licheninase; Glycosyl Hydrolase Family; Family; Coagulation Factor 5/8 Type Domain Protein; Ricin-Type Beta-Trefoil Lectin Domain Protein; Beta-Galactosidase; S-Layer Domain Protein; Glycoside Hydrolase Family Beta-Glycosidase; Xylosidase/Arabinofuranosidase; Cna B Domain Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKILTAILSANLACCLFSVAAAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYYWYGEHKVEGDAGNYAQVGVH CYSSKDLYNWKDEGIALKVVEGDHSHPIAKGCILERPKVVYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKF LKAGRVNPGKWPLNMDKKDQTTEFTKEMPDYVRIIRRDYPGGQMSRDMTIFVDDNGKAYHIYSSEGNITLHIAELTPDYT GHTGKYVRAFINRYMEAPAICKHKGKYYLIASGCTGWAPNAARSAVAKNIAGPWMELKNPCVGPKAGITFGGQSTFILPV QGKPGKFIFMADIWRPKNAIDGRYLWLPMKWEGDQIILEWKDEWTLDDL
Sequences:
>Translated_369_residues MKILTAILSANLACCLFSVAAAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYYWYGEHKVEGDAGNYAQVGVH CYSSKDLYNWKDEGIALKVVEGDHSHPIAKGCILERPKVVYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKF LKAGRVNPGKWPLNMDKKDQTTEFTKEMPDYVRIIRRDYPGGQMSRDMTIFVDDNGKAYHIYSSEGNITLHIAELTPDYT GHTGKYVRAFINRYMEAPAICKHKGKYYLIASGCTGWAPNAARSAVAKNIAGPWMELKNPCVGPKAGITFGGQSTFILPV QGKPGKFIFMADIWRPKNAIDGRYLWLPMKWEGDQIILEWKDEWTLDDL >Mature_369_residues MKILTAILSANLACCLFSVAAAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYYWYGEHKVEGDAGNYAQVGVH CYSSKDLYNWKDEGIALKVVEGDHSHPIAKGCILERPKVVYNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKF LKAGRVNPGKWPLNMDKKDQTTEFTKEMPDYVRIIRRDYPGGQMSRDMTIFVDDNGKAYHIYSSEGNITLHIAELTPDYT GHTGKYVRAFINRYMEAPAICKHKGKYYLIASGCTGWAPNAARSAVAKNIAGPWMELKNPCVGPKAGITFGGQSTFILPV QGKPGKFIFMADIWRPKNAIDGRYLWLPMKWEGDQIILEWKDEWTLDDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41233; Mature: 41233
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILTAILSANLACCLFSVAAAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYY CHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCEEE WYGEHKVEGDAGNYAQVGVHCYSSKDLYNWKDEGIALKVVEGDHSHPIAKGCILERPKVV EEECEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHCEECCCCEEE YNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKFLKAGRVNPGKWPLNMDKKDQ EECCCCCEEEEEEEEEECCCCCCHHCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCC TTEFTKEMPDYVRIIRRDYPGGQMSRDMTIFVDDNGKAYHIYSSEGNITLHIAELTPDYT HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCC GHTGKYVRAFINRYMEAPAICKHKGKYYLIASGCTGWAPNAARSAVAKNIAGPWMELKNP CCCHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCC CVGPKAGITFGGQSTFILPVQGKPGKFIFMADIWRPKNAIDGRYLWLPMKWEGDQIILEW CCCCCCCEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEE KDEWTLDDL CCCCCCCCC >Mature Secondary Structure MKILTAILSANLACCLFSVAAAETPIKHTSFRPGEIWTDNNGAHINAHGGGILYDKGTYY CHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCEEE WYGEHKVEGDAGNYAQVGVHCYSSKDLYNWKDEGIALKVVEGDHSHPIAKGCILERPKVV EEECEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHCEECCCCEEE YNKKTGKYVMWFHLELKGKGYGSAYAGVATAAKPTGPFKFLKAGRVNPGKWPLNMDKKDQ EECCCCCEEEEEEEEEECCCCCCHHCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCC TTEFTKEMPDYVRIIRRDYPGGQMSRDMTIFVDDNGKAYHIYSSEGNITLHIAELTPDYT HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCC GHTGKYVRAFINRYMEAPAICKHKGKYYLIASGCTGWAPNAARSAVAKNIAGPWMELKNP CCCHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCC CVGPKAGITFGGQSTFILPVQGKPGKFIFMADIWRPKNAIDGRYLWLPMKWEGDQIILEW CCCCCCCEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEE KDEWTLDDL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA