Click here to switch to the map view.

The map label for this gene is degQ [C]

Identifier: 187735176

GI number: 187735176

Start: 788262

End: 789842

Strand: Direct

Name: degQ [C]

Synonym: Amuc_0670

Alternate gene names: 187735176

Gene position: 788262-789842 (Clockwise)

Preceding gene: 187735175

Following gene: 187735177

Centisome position: 29.59

GC content: 59.58

Gene sequence:

>1581_bases
ATGAAAATTCTTTCCACTTTTTTCCTCGGTTCCCTGATGTTGCTCGGCGGCTGCCAGCCGCGCGAAGCCGGACGAACCGC
TCCCGAACCCCAGCCTGAACAACAGACGGAAACGCCTGCGGAACAGATGGAGGAAACGCCCGCGCCGGCCCCGCTTCCCT
CCCCCACCGGCTCCATGGTCGGCATTAACGCCACCAATCAGGGCTATGCCATGATTCAGCCGTGGAGCAAGGAAAACCCG
GCGTACAGCCAGGGCTTCGGCATTTATCTGGGAGACGGCAATATCCTGACGGCAGCCAACATCGTTTATTCCGCCAGCTT
CGTGGAAGTGACCTCCGCAGACGGCTCCCAGACGGTTCCCGTGACCGTAACCGCCTTTGACCCGGAAGCCAATCTTGCCC
TTCTGCGCCTGAAAAACGGAAAAGATGCCGCTTTTCTGGACAAACTGGTCCCCGTTGCGCTGGGGAAGGCTCCCCGCCTG
GGCGACAAGGTAACCTTCTGGCAATTCAATGGCGACGGCCTTCCCATCACTACCTCCGGAACCCTTCTGGCGACGGAAAG
CGCCTGCCCGTTCACGAACGGGGAACCGTTCGTCCTGTATAACGTCAAATCCTCCGTCACTCCCCTGAAAGGCGGCGCAG
GCAACCCCGTCATGAGGGGCAATGAACTTGTGGGCCTCAGCGCCAGCTGCGATCCCTCCGCACAGAAAGTGCTGGCCGTA
ACCCATACCATGATTTCCCGGTTCCTGGAACAGGCCCGGGCCGGCAATTACACCGGTTTCCCGGCGGACGGCACCCAGGT
CACGGAACTGACCGACCCCGTCTTCCGCAAATTCCTGGGCCTGCCTGAAACTGGCGGCGGCTTTTACGTGGTGAAACTGC
CTGTTTACGGCTCCTTCTACAAAGCCGGAGTACGTCCCGGAGACGTGGTGGAAAGCGTCAACGGCATCCCTCTGGACAGC
AAAGGTTTAATTAAGGATCCCGCCCTGGGCCCCGTTTCCGCCAACTTTCTGTTCCGAGACTCCGCCAAACCGGGGGATAC
CATTACGCTGGGCATCCGCCGCAAGGGAAAGGACGGCTCCAGCCAGCCCATGACGCTGGACGTCAAACTGGACAGGAGCG
CCCTTGAAGGGGACCTGGTCAATCCGGCCCCCTTCATCTCCAATCCGCCCTACCGCATTTACGGAGGTCTGGTATTTGTC
CCGCTGACGGGAGCCCTGATGGGAGAAATCAACAAGCTCAGCAAGAACCATCCCCCCCTCAACCTGGTGGAAGCCACTCA
AAAGAAAGAGGACATACGGAAAAAAGGCGTGGATGAAATCGTGGTCTTCCTGATGGCCCTGCCCACCCAGGCTACACTGG
GATACGCCCAGATGAGCCCCTCCATTGTGGAAAAAGTCAACGGTGTGCAGGTGAAAAGCTTCAAGCACCTCAACCAGCTT
CTGGACCTTCCCGCTCCCGGCGGCACGCACCGCATCGAAGTGACCCAGCAGCCGTACACCATGTACATGTCCCAGAAGGA
AGCTGCCAAAGCGGACCGCTTCATCCAGATGAGGGCCGTTCCCGTGCTCCGCAGGGACTAG

Upstream 100 bases:

>100_bases
GTATCTCCAAAACCTACAATATCCCGAAAAACGCCCGCTTGGACAGCGCCATTCCCGGCCGCCAGCCTGGCCGCAACACC
ACTCCCGCCCGTTAACCGCC

Downstream 100 bases:

>100_bases
GAATCCGCGAGCCATGTTCACTTGCAGCCCTCCTGGCATGTCACTTCACACGCTGAATATCCGGCTTGATTTTCCCTACA
GGACAGGCTTTACCCATGGA

Product: Trypsin-like protein serine protease typically periplasmic contain C-terminal PDZ domain-like protein

Products: NA

Alternate protein names: Serine Protease; Trypsin-Like Serine Protease; 2-Alkenal Reductase; Trypsin Domain Protein; Serine-Type Endopeptidase; Protease

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MKILSTFFLGSLMLLGGCQPREAGRTAPEPQPEQQTETPAEQMEETPAPAPLPSPTGSMVGINATNQGYAMIQPWSKENP
AYSQGFGIYLGDGNILTAANIVYSASFVEVTSADGSQTVPVTVTAFDPEANLALLRLKNGKDAAFLDKLVPVALGKAPRL
GDKVTFWQFNGDGLPITTSGTLLATESACPFTNGEPFVLYNVKSSVTPLKGGAGNPVMRGNELVGLSASCDPSAQKVLAV
THTMISRFLEQARAGNYTGFPADGTQVTELTDPVFRKFLGLPETGGGFYVVKLPVYGSFYKAGVRPGDVVESVNGIPLDS
KGLIKDPALGPVSANFLFRDSAKPGDTITLGIRRKGKDGSSQPMTLDVKLDRSALEGDLVNPAPFISNPPYRIYGGLVFV
PLTGALMGEINKLSKNHPPLNLVEATQKKEDIRKKGVDEIVVFLMALPTQATLGYAQMSPSIVEKVNGVQVKSFKHLNQL
LDLPAPGGTHRIEVTQQPYTMYMSQKEAAKADRFIQMRAVPVLRRD

Sequences:

>Translated_526_residues
MKILSTFFLGSLMLLGGCQPREAGRTAPEPQPEQQTETPAEQMEETPAPAPLPSPTGSMVGINATNQGYAMIQPWSKENP
AYSQGFGIYLGDGNILTAANIVYSASFVEVTSADGSQTVPVTVTAFDPEANLALLRLKNGKDAAFLDKLVPVALGKAPRL
GDKVTFWQFNGDGLPITTSGTLLATESACPFTNGEPFVLYNVKSSVTPLKGGAGNPVMRGNELVGLSASCDPSAQKVLAV
THTMISRFLEQARAGNYTGFPADGTQVTELTDPVFRKFLGLPETGGGFYVVKLPVYGSFYKAGVRPGDVVESVNGIPLDS
KGLIKDPALGPVSANFLFRDSAKPGDTITLGIRRKGKDGSSQPMTLDVKLDRSALEGDLVNPAPFISNPPYRIYGGLVFV
PLTGALMGEINKLSKNHPPLNLVEATQKKEDIRKKGVDEIVVFLMALPTQATLGYAQMSPSIVEKVNGVQVKSFKHLNQL
LDLPAPGGTHRIEVTQQPYTMYMSQKEAAKADRFIQMRAVPVLRRD
>Mature_526_residues
MKILSTFFLGSLMLLGGCQPREAGRTAPEPQPEQQTETPAEQMEETPAPAPLPSPTGSMVGINATNQGYAMIQPWSKENP
AYSQGFGIYLGDGNILTAANIVYSASFVEVTSADGSQTVPVTVTAFDPEANLALLRLKNGKDAAFLDKLVPVALGKAPRL
GDKVTFWQFNGDGLPITTSGTLLATESACPFTNGEPFVLYNVKSSVTPLKGGAGNPVMRGNELVGLSASCDPSAQKVLAV
THTMISRFLEQARAGNYTGFPADGTQVTELTDPVFRKFLGLPETGGGFYVVKLPVYGSFYKAGVRPGDVVESVNGIPLDS
KGLIKDPALGPVSANFLFRDSAKPGDTITLGIRRKGKDGSSQPMTLDVKLDRSALEGDLVNPAPFISNPPYRIYGGLVFV
PLTGALMGEINKLSKNHPPLNLVEATQKKEDIRKKGVDEIVVFLMALPTQATLGYAQMSPSIVEKVNGVQVKSFKHLNQL
LDLPAPGGTHRIEVTQQPYTMYMSQKEAAKADRFIQMRAVPVLRRD

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 56316; Mature: 56316

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILSTFFLGSLMLLGGCQPREAGRTAPEPQPEQQTETPAEQMEETPAPAPLPSPTGSMV
CCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEE
GINATNQGYAMIQPWSKENPAYSQGFGIYLGDGNILTAANIVYSASFVEVTSADGSQTVP
EEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEHEEEEEEEEEEECCCCCEEEE
VTVTAFDPEANLALLRLKNGKDAAFLDKLVPVALGKAPRLGDKVTFWQFNGDGLPITTSG
EEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCC
TLLATESACPFTNGEPFVLYNVKSSVTPLKGGAGNPVMRGNELVGLSASCDPSAQKVLAV
CEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
THTMISRFLEQARAGNYTGFPADGTQVTELTDPVFRKFLGLPETGGGFYVVKLPVYGSFY
HHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
KAGVRPGDVVESVNGIPLDSKGLIKDPALGPVSANFLFRDSAKPGDTITLGIRRKGKDGS
HCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCC
SQPMTLDVKLDRSALEGDLVNPAPFISNPPYRIYGGLVFVPLTGALMGEINKLSKNHPPL
CCCEEEEEEECCHHHCCCCCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHCCCCCC
NLVEATQKKEDIRKKGVDEIVVFLMALPTQATLGYAQMSPSIVEKVNGVQVKSFKHLNQL
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCHHHCCHHHHHHCCCCEEHHHHHHHHH
LDLPAPGGTHRIEVTQQPYTMYMSQKEAAKADRFIQMRAVPVLRRD
HCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHEEEEECCCHHCCC
>Mature Secondary Structure
MKILSTFFLGSLMLLGGCQPREAGRTAPEPQPEQQTETPAEQMEETPAPAPLPSPTGSMV
CCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEE
GINATNQGYAMIQPWSKENPAYSQGFGIYLGDGNILTAANIVYSASFVEVTSADGSQTVP
EEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEHEEEEEEEEEEECCCCCEEEE
VTVTAFDPEANLALLRLKNGKDAAFLDKLVPVALGKAPRLGDKVTFWQFNGDGLPITTSG
EEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCC
TLLATESACPFTNGEPFVLYNVKSSVTPLKGGAGNPVMRGNELVGLSASCDPSAQKVLAV
CEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
THTMISRFLEQARAGNYTGFPADGTQVTELTDPVFRKFLGLPETGGGFYVVKLPVYGSFY
HHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
KAGVRPGDVVESVNGIPLDSKGLIKDPALGPVSANFLFRDSAKPGDTITLGIRRKGKDGS
HCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCC
SQPMTLDVKLDRSALEGDLVNPAPFISNPPYRIYGGLVFVPLTGALMGEINKLSKNHPPL
CCCEEEEEEECCHHHCCCCCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHCCCCCC
NLVEATQKKEDIRKKGVDEIVVFLMALPTQATLGYAQMSPSIVEKVNGVQVKSFKHLNQL
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCHHHCCHHHHHHCCCCEEHHHHHHHHH
LDLPAPGGTHRIEVTQQPYTMYMSQKEAAKADRFIQMRAVPVLRRD
HCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA