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The map label for this gene is recA [H]

Identifier: 187735169

GI number: 187735169

Start: 780338

End: 781378

Strand: Direct

Name: recA [H]

Synonym: Amuc_0663

Alternate gene names: 187735169

Gene position: 780338-781378 (Clockwise)

Preceding gene: 187735168

Following gene: 187735170

Centisome position: 29.29

GC content: 57.73

Gene sequence:

>1041_bases
ATGAGCAACGAAACACCTTTATCCCCCGAAGCGGAAAAACTGGCGGCAGCCCGCAAGCGCAACCTTGACCTGGCCCTCTC
CCAAATCCAGAAAGACTTCGGAGAAAACGCCATTATGCGCCTTGGAGACAACGTCAAAATGGAAGTGGACGTCATTCCCA
CGGGCAACCTTCTGATTGACCGCGCTCTGGGTGTGGGCGGCTTTGCCCGCGGCCGCATTGTGGAAATCTACGGACCGGAA
TCCTCCGGTAAAACCACCCTGACCCTGACGGCCATCGCCCAGGCCCAGAAATCCGGAGGCCTGGCTGCATTCATTGACGT
GGAACACGCACTGGACCCTCAGTATGCCGCCCGCCTGGGCGTGAACCTGGACGACCTGCTGGTTTCCCAGCCAAGTTCCG
GTGAAGAAGCCCTGCAAATCTGTGAGGCTCTTGTCCGCTCCAATGCCATTGACGTCATCGTGGTGGACTCCGTGGCCGCA
CTGGTCACCAAGCAGGAGCTGGAAGGAGAAATCGGGGATTCCACGGTAGGAGCCCAGGCCCGTTTGATGTCCGCCGCCCT
CCGCAAGCTCACCAGCTTCATTTCCAAGGCCCGTACCGTCTGTATCTTCACCAACCAGATCCGTGAAAAAATCGGCGTCA
TGTTCGGCAATCCGGAAACCACTCCCGGCGGCCGCGCCCTGAAATTCTACGCCTCCGTACGTGTGGACATCCGCCGCATC
GGCCAGATCAAGGGCAGCGACGGCGTCATAGCCGGGAACCGCACCAAAATCAAGGTAGTCAAAAACAAAGTGGCTCCTCC
CTTCACGGAATGCGAATTCGACATCATGTACAATGAAGGCATCTCCTCCGTAGGCAGCCTGCTGGATCTGGCAACGGAAT
ATGATATCATCCAGAAGCGCGGCTCCTGGATCAGCTATAACGGCAGCCAGATCGCCCAGGGCCGCGACGCCGCCAAGGAA
GCTCTCAAATCCAACCCGGAGCTGTACGCGGAAATTGAAGAACAGGTCAAGGCCAAAATGGACGAGAAGACCGCCAAATA
A

Upstream 100 bases:

>100_bases
CCATGTCAGAATTCTGTTCTTTCTCAATGGGGAATGAGTCTGCGAAGACCCACAGAACACTTGCCAATAAGGCTGTCCCG
GTTATACTGCGCTACGATAT

Downstream 100 bases:

>100_bases
TCCCGCCTGATCCCGTTCCTTCACTGCCATTTCAGGGCGGCTCCCCTTCCCGGGAGCCGCTTTTTTCTCTCCGGAAACAG
AAGCGCAAAAGAATCTTTCA

Product: recA protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSNETPLSPEAEKLAAARKRNLDLALSQIQKDFGENAIMRLGDNVKMEVDVIPTGNLLIDRALGVGGFARGRIVEIYGPE
SSGKTTLTLTAIAQAQKSGGLAAFIDVEHALDPQYAARLGVNLDDLLVSQPSSGEEALQICEALVRSNAIDVIVVDSVAA
LVTKQELEGEIGDSTVGAQARLMSAALRKLTSFISKARTVCIFTNQIREKIGVMFGNPETTPGGRALKFYASVRVDIRRI
GQIKGSDGVIAGNRTKIKVVKNKVAPPFTECEFDIMYNEGISSVGSLLDLATEYDIIQKRGSWISYNGSQIAQGRDAAKE
ALKSNPELYAEIEEQVKAKMDEKTAK

Sequences:

>Translated_346_residues
MSNETPLSPEAEKLAAARKRNLDLALSQIQKDFGENAIMRLGDNVKMEVDVIPTGNLLIDRALGVGGFARGRIVEIYGPE
SSGKTTLTLTAIAQAQKSGGLAAFIDVEHALDPQYAARLGVNLDDLLVSQPSSGEEALQICEALVRSNAIDVIVVDSVAA
LVTKQELEGEIGDSTVGAQARLMSAALRKLTSFISKARTVCIFTNQIREKIGVMFGNPETTPGGRALKFYASVRVDIRRI
GQIKGSDGVIAGNRTKIKVVKNKVAPPFTECEFDIMYNEGISSVGSLLDLATEYDIIQKRGSWISYNGSQIAQGRDAAKE
ALKSNPELYAEIEEQVKAKMDEKTAK
>Mature_345_residues
SNETPLSPEAEKLAAARKRNLDLALSQIQKDFGENAIMRLGDNVKMEVDVIPTGNLLIDRALGVGGFARGRIVEIYGPES
SGKTTLTLTAIAQAQKSGGLAAFIDVEHALDPQYAARLGVNLDDLLVSQPSSGEEALQICEALVRSNAIDVIVVDSVAAL
VTKQELEGEIGDSTVGAQARLMSAALRKLTSFISKARTVCIFTNQIREKIGVMFGNPETTPGGRALKFYASVRVDIRRIG
QIKGSDGVIAGNRTKIKVVKNKVAPPFTECEFDIMYNEGISSVGSLLDLATEYDIIQKRGSWISYNGSQIAQGRDAAKEA
LKSNPELYAEIEEQVKAKMDEKTAK

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=320, Percent_Identity=59.375, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37289; Mature: 37158

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNETPLSPEAEKLAAARKRNLDLALSQIQKDFGENAIMRLGDNVKMEVDVIPTGNLLID
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCEEEE
RALGVGGFARGRIVEIYGPESSGKTTLTLTAIAQAQKSGGLAAFIDVEHALDPQYAARLG
HHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEEEEHHHCCHHHHHHHC
VNLDDLLVSQPSSGEEALQICEALVRSNAIDVIVVDSVAALVTKQELEGEIGDSTVGAQA
CCHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCHHH
RLMSAALRKLTSFISKARTVCIFTNQIREKIGVMFGNPETTPGGRALKFYASVRVDIRRI
HHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEHHHHHHHHHH
GQIKGSDGVIAGNRTKIKVVKNKVAPPFTECEFDIMYNEGISSVGSLLDLATEYDIIQKR
CCCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
GSWISYNGSQIAQGRDAAKEALKSNPELYAEIEEQVKAKMDEKTAK
CCEEEECCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNETPLSPEAEKLAAARKRNLDLALSQIQKDFGENAIMRLGDNVKMEVDVIPTGNLLID
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCEEEE
RALGVGGFARGRIVEIYGPESSGKTTLTLTAIAQAQKSGGLAAFIDVEHALDPQYAARLG
HHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEEEEHHHCCHHHHHHHC
VNLDDLLVSQPSSGEEALQICEALVRSNAIDVIVVDSVAALVTKQELEGEIGDSTVGAQA
CCHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCHHH
RLMSAALRKLTSFISKARTVCIFTNQIREKIGVMFGNPETTPGGRALKFYASVRVDIRRI
HHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEHHHHHHHHHH
GQIKGSDGVIAGNRTKIKVVKNKVAPPFTECEFDIMYNEGISSVGSLLDLATEYDIIQKR
CCCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
GSWISYNGSQIAQGRDAAKEALKSNPELYAEIEEQVKAKMDEKTAK
CCEEEECCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]