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The map label for this gene is yqiI [H]

Identifier: 187735170

GI number: 187735170

Start: 781538

End: 782557

Strand: Direct

Name: yqiI [H]

Synonym: Amuc_0664

Alternate gene names: 187735170

Gene position: 781538-782557 (Clockwise)

Preceding gene: 187735169

Following gene: 187735171

Centisome position: 29.34

GC content: 58.14

Gene sequence:

>1020_bases
ATGTATCCGACCTCTCGCACATCATTTGCAGCCGTGCTCGGCATTGTGGGCATGTTTCTGCTGACGTTGTCCACGGCCTT
CGGATGGAATCCGGAAATCATTAATGGAGTGCAGTATATTCCGATGTCCGAAGTGCGCACCCATTACAAACTGACCAGGG
AACGCACGGAAGGGCGGCAGAAAGTTTACGAGGTGCCGGAAAAGATTCAAATCCGTATCCAGGCGCGCAGCCAGGAGATG
TTCATGAACAACATGAAGTTCGTGCTATCCTATCCTGTGGCTGACCATCCCTCCAAGGGGCTGATGGTTTCCAATATGGA
CCTGCACAAAATCATTGACCCGGTTCTGCGCCCCACTTACATCGCCAACCGCCGCAGTTTCAACACAGTAGTCATTGATC
CCGGCCACGGCGGCCATGACAGCGGCACGCGTAACCGCATCAGCAGGGAAGCGGACATCAACCTTTCTGTGGGCAAAAAG
CTGCGCGACCGCCTCAAGGCCATGGGCTACCAGGTGGTCATGACCCGTGACACGGACAACTTCATTGCCCTTCAGGACCG
CGTCCGCATTGCCAACAGGCACAATAATGCCATCTTCATCAGCATCCACTTCAATGACGGAGGCTCTTCTGCCCGCGGGG
TGGAAACCTTCACGCTGGCGCCCGCGGGCACTTCCTCCTCCATGTCCCGCAATATCCGCCACGACGCCCTGCAGGGCAAC
GCCCAGGACAGCATGAACATCGCCCTGGCTACAGCCGTCCAGGGGCACATGCTGAAAGGACCGCTTGCCATTAAGGAGGG
CATTTCCATGGTTGACCGCGGCATCAAGCGCGCGCGCTATTCCGTGCTGTGTACCATCAAGCATCCCGCCATTCTGGTGG
AAGGCGGGTTCATGTCCAACCCGCAGGAGGCCCTGCTCATCGCCACGGAGCGTTATCAGAATTTCATGGCCTCTTCCCTG
GCCGCCGCCGTGCACCAGTACCGCACCGCCCTGGGCCAGCAAGTGCGCAGAACGCGCTGA

Upstream 100 bases:

>100_bases
CTTTTTTCTCTCCGGAAACAGAAGCGCAAAAGAATCTTTCACGGAAACTTTTCCCTTGTGCGTCATGAAAAATCCGTTAG
TCTGGATGCGATATCGTCCT

Downstream 100 bases:

>100_bases
GTTCCCTAACTGTCCCGGGGCCTCCCTTCAGCAGCATGAACATCATCCGCATTCCCGGCCTGGCAGATTATCAGGAAACC
TTGAGGCTCCAGGAACAACT

Product: cell wall hydrolase/autolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MYPTSRTSFAAVLGIVGMFLLTLSTAFGWNPEIINGVQYIPMSEVRTHYKLTRERTEGRQKVYEVPEKIQIRIQARSQEM
FMNNMKFVLSYPVADHPSKGLMVSNMDLHKIIDPVLRPTYIANRRSFNTVVIDPGHGGHDSGTRNRISREADINLSVGKK
LRDRLKAMGYQVVMTRDTDNFIALQDRVRIANRHNNAIFISIHFNDGGSSARGVETFTLAPAGTSSSMSRNIRHDALQGN
AQDSMNIALATAVQGHMLKGPLAIKEGISMVDRGIKRARYSVLCTIKHPAILVEGGFMSNPQEALLIATERYQNFMASSL
AAAVHQYRTALGQQVRRTR

Sequences:

>Translated_339_residues
MYPTSRTSFAAVLGIVGMFLLTLSTAFGWNPEIINGVQYIPMSEVRTHYKLTRERTEGRQKVYEVPEKIQIRIQARSQEM
FMNNMKFVLSYPVADHPSKGLMVSNMDLHKIIDPVLRPTYIANRRSFNTVVIDPGHGGHDSGTRNRISREADINLSVGKK
LRDRLKAMGYQVVMTRDTDNFIALQDRVRIANRHNNAIFISIHFNDGGSSARGVETFTLAPAGTSSSMSRNIRHDALQGN
AQDSMNIALATAVQGHMLKGPLAIKEGISMVDRGIKRARYSVLCTIKHPAILVEGGFMSNPQEALLIATERYQNFMASSL
AAAVHQYRTALGQQVRRTR
>Mature_339_residues
MYPTSRTSFAAVLGIVGMFLLTLSTAFGWNPEIINGVQYIPMSEVRTHYKLTRERTEGRQKVYEVPEKIQIRIQARSQEM
FMNNMKFVLSYPVADHPSKGLMVSNMDLHKIIDPVLRPTYIANRRSFNTVVIDPGHGGHDSGTRNRISREADINLSVGKK
LRDRLKAMGYQVVMTRDTDNFIALQDRVRIANRHNNAIFISIHFNDGGSSARGVETFTLAPAGTSSSMSRNIRHDALQGN
AQDSMNIALATAVQGHMLKGPLAIKEGISMVDRGIKRARYSVLCTIKHPAILVEGGFMSNPQEALLIATERYQNFMASSL
AAAVHQYRTALGQQVRRTR

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788776, Length=218, Percent_Identity=33.4862385321101, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082163, Length=246, Percent_Identity=28.4552845528455, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790611, Length=244, Percent_Identity=28.6885245901639, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 37875; Mature: 37875

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPTSRTSFAAVLGIVGMFLLTLSTAFGWNPEIINGVQYIPMSEVRTHYKLTRERTEGRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEECCCHHHHHHHHHHHHHHHHHHH
KVYEVPEKIQIRIQARSQEMFMNNMKFVLSYPVADHPSKGLMVSNMDLHKIIDPVLRPTY
HHHHCCCEEEEEEEECHHHHHHCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCE
IANRRSFNTVVIDPGHGGHDSGTRNRISREADINLSVGKKLRDRLKAMGYQVVMTRDTDN
EECCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCC
FIALQDRVRIANRHNNAIFISIHFNDGGSSARGVETFTLAPAGTSSSMSRNIRHDALQGN
EEEEHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
AQDSMNIALATAVQGHMLKGPLAIKEGISMVDRGIKRARYSVLCTIKHPAILVEGGFMSN
CCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEEECCCCCC
PQEALLIATERYQNFMASSLAAAVHQYRTALGQQVRRTR
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYPTSRTSFAAVLGIVGMFLLTLSTAFGWNPEIINGVQYIPMSEVRTHYKLTRERTEGRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEECCCHHHHHHHHHHHHHHHHHHH
KVYEVPEKIQIRIQARSQEMFMNNMKFVLSYPVADHPSKGLMVSNMDLHKIIDPVLRPTY
HHHHCCCEEEEEEEECHHHHHHCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCE
IANRRSFNTVVIDPGHGGHDSGTRNRISREADINLSVGKKLRDRLKAMGYQVVMTRDTDN
EECCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCC
FIALQDRVRIANRHNNAIFISIHFNDGGSSARGVETFTLAPAGTSSSMSRNIRHDALQGN
EEEEHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
AQDSMNIALATAVQGHMLKGPLAIKEGISMVDRGIKRARYSVLCTIKHPAILVEGGFMSN
CCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEEECCCCCC
PQEALLIATERYQNFMASSLAAAVHQYRTALGQQVRRTR
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]