Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476921
Identifier: 186476921
GI number: 186476921
Start: 2433113
End: 2434285
Strand: Direct
Name: 186476921
Synonym: Bphy_2170
Alternate gene names: NA
Gene position: 2433113-2434285 (Clockwise)
Preceding gene: 186476918
Following gene: 186476922
Centisome position: 69.93
GC content: 62.66
Gene sequence:
>1173_bases TTGAACCAGGAACGTTTTGATTACCGCGCGGGTATCCTCGCTTCGCCGCTCGAAGTCGATGCCGCCGAATGGAACGCGTT GCTGAGCCGCCAGGCGCAGCCCACGCCATTCTTGCGCCATGAATTCCTGAGCGCACTGCACGCGACGAAATGCGCCGTCG CCGATACGGGCTGGGCGCCGCAATTCGTCACGCTGACGGACCCGCGCACGGGCAAGCTGGCCGCGGCCGCACCCGTCTAC GCGAAGGGACACTCGTACGGCGAATACGTGTTCGACTGGGCGTGGGCCGACGCGTACAAGCGCAACGGCCTGCCCTACTA TCCGAAGCTGCTGTGCGCAGTGCCTTTCACGCCGGTTCAGGGCACGCGCTTGCTCGCCGTCGACGAACACGCGCTGCGCC ACCTGTCCGCGACGCTCGTCGCATTTGCCGAACAGGCCGACGTGTCGTCGCTGCACGTGCTGTTTCCAACTGAACGCGAA GCGCAGGTGCTGACCGATCTCGGCATGATGCTGCGCGAAGGCGTGCAGTTTCACTGGATCAACGACGGCTACCGCGACTT CGACGACTTCCTGTCGACGCTCGAACAGAAGAAGCGCAAGAACATCCGCGCCGAGCGCCGCAAGGTGCGCGATGCGGGCG TCACGTTCAGGCGCATGCCTGGCGAGGACATCGGCGACGCCGACTGGCGCTTTTTCAGCAAGTGCTATCGGCAAACGTAT CGCGAGCACTTTTCGAGTCCGTATCTGAATCTCGACTTCTTCCGCATGATCGGCGAGTCGATGCCCGAGAATCTGATGAT GGTGATCGCGGAATACGAGGGCAAACCGATCGCAAGCTCGCTCGTCGTCTATCAGCGCGACGGCGCGAACGCGGGCGGCA CGCTGTACGGCCGTTACTGGGGCGCACTCGAACACGTGCCGTGCCTGCACTTCGAGACCGCGTACTATCAGCCGCTCGAG TTCTGCATCGAACAGAAGCTCGGCGTCTTCGAAGGCGGCGCGCAGGGCGAACACAAGATGGCACGCGGCTTCATGCCCAC CGTCACGCGCTCGACGCACTGGCTCGCACATCCCGCCTTTTCGGACGCCGTTGCGCACTTCCTCGACAACGAGAAAAATC ACATTCACGCGTACGTCGACGAACTGCGCGAACACAATCCGTTCAGGGAATAA
Upstream 100 bases:
>100_bases TGCCGCGCACTTCGCGCGCGCATTTGCTTTAACATGGCCGTTCGCTGCGCCGCGCGCAATCGCGAGCACAGGCAGCAAGA ATCGCCAACGGTCGAACAGA
Downstream 100 bases:
>100_bases CCGGGGAATTCGCGCGCCATGCCGTGGTTTCTGTATCTGATCGAATGCTCGGACGGCAGCGTCTACACGGGCATTGCCAC TGACGTGCAAGCCCGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MNQERFDYRAGILASPLEVDAAEWNALLSRQAQPTPFLRHEFLSALHATKCAVADTGWAPQFVTLTDPRTGKLAAAAPVY AKGHSYGEYVFDWAWADAYKRNGLPYYPKLLCAVPFTPVQGTRLLAVDEHALRHLSATLVAFAEQADVSSLHVLFPTERE AQVLTDLGMMLREGVQFHWINDGYRDFDDFLSTLEQKKRKNIRAERRKVRDAGVTFRRMPGEDIGDADWRFFSKCYRQTY REHFSSPYLNLDFFRMIGESMPENLMMVIAEYEGKPIASSLVVYQRDGANAGGTLYGRYWGALEHVPCLHFETAYYQPLE FCIEQKLGVFEGGAQGEHKMARGFMPTVTRSTHWLAHPAFSDAVAHFLDNEKNHIHAYVDELREHNPFRE
Sequences:
>Translated_390_residues MNQERFDYRAGILASPLEVDAAEWNALLSRQAQPTPFLRHEFLSALHATKCAVADTGWAPQFVTLTDPRTGKLAAAAPVY AKGHSYGEYVFDWAWADAYKRNGLPYYPKLLCAVPFTPVQGTRLLAVDEHALRHLSATLVAFAEQADVSSLHVLFPTERE AQVLTDLGMMLREGVQFHWINDGYRDFDDFLSTLEQKKRKNIRAERRKVRDAGVTFRRMPGEDIGDADWRFFSKCYRQTY REHFSSPYLNLDFFRMIGESMPENLMMVIAEYEGKPIASSLVVYQRDGANAGGTLYGRYWGALEHVPCLHFETAYYQPLE FCIEQKLGVFEGGAQGEHKMARGFMPTVTRSTHWLAHPAFSDAVAHFLDNEKNHIHAYVDELREHNPFRE >Mature_390_residues MNQERFDYRAGILASPLEVDAAEWNALLSRQAQPTPFLRHEFLSALHATKCAVADTGWAPQFVTLTDPRTGKLAAAAPVY AKGHSYGEYVFDWAWADAYKRNGLPYYPKLLCAVPFTPVQGTRLLAVDEHALRHLSATLVAFAEQADVSSLHVLFPTERE AQVLTDLGMMLREGVQFHWINDGYRDFDDFLSTLEQKKRKNIRAERRKVRDAGVTFRRMPGEDIGDADWRFFSKCYRQTY REHFSSPYLNLDFFRMIGESMPENLMMVIAEYEGKPIASSLVVYQRDGANAGGTLYGRYWGALEHVPCLHFETAYYQPLE FCIEQKLGVFEGGAQGEHKMARGFMPTVTRSTHWLAHPAFSDAVAHFLDNEKNHIHAYVDELREHNPFRE
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44612; Mature: 44612
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS01143 RIBOSOMAL_L31
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQERFDYRAGILASPLEVDAAEWNALLSRQAQPTPFLRHEFLSALHATKCAVADTGWAP CCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC QFVTLTDPRTGKLAAAAPVYAKGHSYGEYVFDWAWADAYKRNGLPYYPKLLCAVPFTPVQ EEEEECCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC GTRLLAVDEHALRHLSATLVAFAEQADVSSLHVLFPTEREAQVLTDLGMMLREGVQFHWI CCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEE NDGYRDFDDFLSTLEQKKRKNIRAERRKVRDAGVTFRRMPGEDIGDADWRFFSKCYRQTY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHH REHFSSPYLNLDFFRMIGESMPENLMMVIAEYEGKPIASSLVVYQRDGANAGGTLYGRYW HHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHEEEEEECCCCCCCCCCHHHHH GALEHVPCLHFETAYYQPLEFCIEQKLGVFEGGAQGEHKMARGFMPTVTRSTHWLAHPAF HHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCHH SDAVAHFLDNEKNHIHAYVDELREHNPFRE HHHHHHHHCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNQERFDYRAGILASPLEVDAAEWNALLSRQAQPTPFLRHEFLSALHATKCAVADTGWAP CCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC QFVTLTDPRTGKLAAAAPVYAKGHSYGEYVFDWAWADAYKRNGLPYYPKLLCAVPFTPVQ EEEEECCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC GTRLLAVDEHALRHLSATLVAFAEQADVSSLHVLFPTEREAQVLTDLGMMLREGVQFHWI CCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEE NDGYRDFDDFLSTLEQKKRKNIRAERRKVRDAGVTFRRMPGEDIGDADWRFFSKCYRQTY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHH REHFSSPYLNLDFFRMIGESMPENLMMVIAEYEGKPIASSLVVYQRDGANAGGTLYGRYW HHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHEEEEEECCCCCCCCCCHHHHH GALEHVPCLHFETAYYQPLEFCIEQKLGVFEGGAQGEHKMARGFMPTVTRSTHWLAHPAF HHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCHH SDAVAHFLDNEKNHIHAYVDELREHNPFRE HHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA