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The map label for this gene is 186476918

Identifier: 186476918

GI number: 186476918

Start: 2429026

End: 2430135

Strand: Direct

Name: 186476918

Synonym: Bphy_2167

Alternate gene names: NA

Gene position: 2429026-2430135 (Clockwise)

Preceding gene: 186476917

Following gene: 186476921

Centisome position: 69.82

GC content: 62.25

Gene sequence:

>1110_bases
ATGAAGAAAGCTTTGGCTGCCGCGGCGCTGCTGACGTTCGGCGTTGCAGCACACGCACAGAGCAGCGTGACGCTGTACGG
GCGTCTCGACGCTGGTCTGGAGTACATGTCGGGTGTACCCACGAGCGCGACGGGTAGCGGCACTGCGACGAGCAGCACGC
ACCGCTTCCGCGCAGAAAGCGGTGACTGGGGTACCAGCCTGTGGGGTTTGAAGGGTGCTGAAGATCTGGGCGGCGGCTAC
AAGGCCGTTTTCCAGTTGGAAGGCTCGTTCAACACGATGACGGGTGCAGGCCCGGGCGGCGGCGGTCTCTTCAATCGCTG
GGCGACGGTCGGCTTCGCAAGCGATCAGTACGGTACGTTCACGATGGGTCGCATGCTGTTCATCTCGAACGGCGTGTGGG
ACTTCGACCCGTTTGGCCAGTCGAACTGGTCGTCGGCATCGCTGGTCCGTGGCCGCAACTGGCCACAATCGAGCAACAAC
GTTGCGTACCAGTCGCCGAAGATCGCTGGTCTTGACTTCTACGGTCAGTACGCACTGTCGAACGCGACGAACTGGAACGG
CAACGGCACGACGGCTCAGGGTCGCGAAGCAGGTGCACAGGTCACGTACACGTCGTCGCTCTTCCAGTTGCGTGGTATCT
ATGACGAAATCCGCAACCCGGCTAACGGCGGCCTGAACGACTCGTATAACTTCTCGCGCGAGTACACGGCTGCATTCAAC
GTGTTCCTCGGCCAGTTCAAGATCCAGGGCGCGTACCAGGCAATCCGCACGTCGGGCATCACGGCAGCAACGCCGGGCAC
GCCGACGACGCTCGACCACGAATGGGGCGGCGTGACGTGGCAAGCTACGCCGGCAGCAGCGCTGATCGGTGCGGTGTACC
ACGTGAACGGCAACAACGGTGCGGGCAACGCGACGATCTATACGCTGGGCGGCTCGTACAACCTGTCGAAGCGCACGCTG
TTCGACCTGCAGGTTGCAACGGTGCAGAACAGCAAGACGGCCAACTACGGTCTGAACGCCAATCCGGCGGGCAACACCGT
GGCGTCGGATAACCCGTTGATCGGTCACAGCCAGACGGGCGTGTACGCAGGTATCCAGCACTCGTTCTAA

Upstream 100 bases:

>100_bases
CGCACCACTGTCCCTGAAGAAGATTCCTGCTCGGCGCTGCTGGCGTCCGGGCACCACTCGCAGTACTGGCTTTACTTTTT
GACAGGGTATGGAGGAGAAG

Downstream 100 bases:

>100_bases
TCGAACGGTGCGAACAGAACAGCTTTAACAGAAACGGTTTTCACGCTGCTGCGAGAGGCGCGTATCGGTGCGATGTCCGA
AAGGGTATCGCACCTTTTTT

Product: OmpC family outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKKALAAAALLTFGVAAHAQSSVTLYGRLDAGLEYMSGVPTSATGSGTATSSTHRFRAESGDWGTSLWGLKGAEDLGGGY
KAVFQLEGSFNTMTGAGPGGGGLFNRWATVGFASDQYGTFTMGRMLFISNGVWDFDPFGQSNWSSASLVRGRNWPQSSNN
VAYQSPKIAGLDFYGQYALSNATNWNGNGTTAQGREAGAQVTYTSSLFQLRGIYDEIRNPANGGLNDSYNFSREYTAAFN
VFLGQFKIQGAYQAIRTSGITAATPGTPTTLDHEWGGVTWQATPAAALIGAVYHVNGNNGAGNATIYTLGGSYNLSKRTL
FDLQVATVQNSKTANYGLNANPAGNTVASDNPLIGHSQTGVYAGIQHSF

Sequences:

>Translated_369_residues
MKKALAAAALLTFGVAAHAQSSVTLYGRLDAGLEYMSGVPTSATGSGTATSSTHRFRAESGDWGTSLWGLKGAEDLGGGY
KAVFQLEGSFNTMTGAGPGGGGLFNRWATVGFASDQYGTFTMGRMLFISNGVWDFDPFGQSNWSSASLVRGRNWPQSSNN
VAYQSPKIAGLDFYGQYALSNATNWNGNGTTAQGREAGAQVTYTSSLFQLRGIYDEIRNPANGGLNDSYNFSREYTAAFN
VFLGQFKIQGAYQAIRTSGITAATPGTPTTLDHEWGGVTWQATPAAALIGAVYHVNGNNGAGNATIYTLGGSYNLSKRTL
FDLQVATVQNSKTANYGLNANPAGNTVASDNPLIGHSQTGVYAGIQHSF
>Mature_369_residues
MKKALAAAALLTFGVAAHAQSSVTLYGRLDAGLEYMSGVPTSATGSGTATSSTHRFRAESGDWGTSLWGLKGAEDLGGGY
KAVFQLEGSFNTMTGAGPGGGGLFNRWATVGFASDQYGTFTMGRMLFISNGVWDFDPFGQSNWSSASLVRGRNWPQSSNN
VAYQSPKIAGLDFYGQYALSNATNWNGNGTTAQGREAGAQVTYTSSLFQLRGIYDEIRNPANGGLNDSYNFSREYTAAFN
VFLGQFKIQGAYQAIRTSGITAATPGTPTTLDHEWGGVTWQATPAAALIGAVYHVNGNNGAGNATIYTLGGSYNLSKRTL
FDLQVATVQNSKTANYGLNANPAGNTVASDNPLIGHSQTGVYAGIQHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38809; Mature: 38809

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALAAAALLTFGVAAHAQSSVTLYGRLDAGLEYMSGVPTSATGSGTATSSTHRFRAES
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEECCC
GDWGTSLWGLKGAEDLGGGYKAVFQLEGSFNTMTGAGPGGGGLFNRWATVGFASDQYGTF
CCCCCEECCCCCCHHHCCCEEEEEEECCCCCEECCCCCCCCCHHHHHEEEEECCCCCCEE
TMGRMLFISNGVWDFDPFGQSNWSSASLVRGRNWPQSSNNVAYQSPKIAGLDFYGQYALS
ECCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCCEECEECCCCEEEC
NATNWNGNGTTAQGREAGAQVTYTSSLFQLRGIYDEIRNPANGGLNDSYNFSREYTAAFN
CCCCCCCCCCCCCCHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEE
VFLGQFKIQGAYQAIRTSGITAATPGTPTTLDHEWGGVTWQATPAAALIGAVYHVNGNNG
EEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCHHHEEEEEEEEECCCC
AGNATIYTLGGSYNLSKRTLFDLQVATVQNSKTANYGLNANPAGNTVASDNPLIGHSQTG
CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VYAGIQHSF
EEEECCCCC
>Mature Secondary Structure
MKKALAAAALLTFGVAAHAQSSVTLYGRLDAGLEYMSGVPTSATGSGTATSSTHRFRAES
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEECCC
GDWGTSLWGLKGAEDLGGGYKAVFQLEGSFNTMTGAGPGGGGLFNRWATVGFASDQYGTF
CCCCCEECCCCCCHHHCCCEEEEEEECCCCCEECCCCCCCCCHHHHHEEEEECCCCCCEE
TMGRMLFISNGVWDFDPFGQSNWSSASLVRGRNWPQSSNNVAYQSPKIAGLDFYGQYALS
ECCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCCEECEECCCCEEEC
NATNWNGNGTTAQGREAGAQVTYTSSLFQLRGIYDEIRNPANGGLNDSYNFSREYTAAFN
CCCCCCCCCCCCCCHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEE
VFLGQFKIQGAYQAIRTSGITAATPGTPTTLDHEWGGVTWQATPAAALIGAVYHVNGNNG
EEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCHHHEEEEEEEEECCCC
AGNATIYTLGGSYNLSKRTLFDLQVATVQNSKTANYGLNANPAGNTVASDNPLIGHSQTG
CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VYAGIQHSF
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]