Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476912
Identifier: 186476912
GI number: 186476912
Start: 2423349
End: 2423897
Strand: Direct
Name: 186476912
Synonym: Bphy_2161
Alternate gene names: NA
Gene position: 2423349-2423897 (Clockwise)
Preceding gene: 186476909
Following gene: 186476914
Centisome position: 69.65
GC content: 60.66
Gene sequence:
>549_bases ATGTCCAAAAAAACATCACGCTTTCTCGCCATTGCCGCTGCATCGCTCGCGCTGAGTCTCGGGTCTGCCTTCGCCGCGCA ACCGTCGGACGGCCCCGGCGGCCCGGGCATGGGCCACGGCGGTCCGGGCTGGCATCACGGCGGGTTCATGAAGGAACTCA ACCAGTTGCACGGGCAACTGAAACTGAACGCCGACCAGGAAAAGTCATGGCAGGCCGCGCTCGACACGATGAAGCAAAGC CATGAAGCCGAACGCGCGAATCACGAGCAGATGCGCCAGCAGTTCAAGCAGTTGCAGCAGCAGCCAATTCTCGACCTCAA CGCGATGCACGCCGCGCATCAGCAAATCGAGCAAAAGGATGCGCAGCTGCGCGAACAGACGGCAACGGCATGGCTCAACT TCTACAACGGCCTGAACGATCAACAGAAGACCACCGTCAGCACGGCGCTCAAGCAGCACTTCGCGAAGATGGAGCAGCGT CACGACAAGATGCGCGAGCGCTGGGAAAAGCATCGAGGCGATGAGGCGGCCTCAGCTGTGAAGCCTTAA
Upstream 100 bases:
>100_bases GGCCCTCGTTCGATGCCTCTACGCTGTGCCTTACCGAATGCACGCCAGTTCACCTTCGAGACGGGCGGCATCGTCGGCCA GTTGATCAAGGAGCACAGTA
Downstream 100 bases:
>100_bases GCAGAACGCTCGCACCGCCCCGACAAGAAAAACGCCACGGCAAAGCGCTTCCGTGGCGTTGCTACGTGGCACGTCGGAAT GTACCGACGAACGCGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKKTSRFLAIAAASLALSLGSAFAAQPSDGPGGPGMGHGGPGWHHGGFMKELNQLHGQLKLNADQEKSWQAALDTMKQS HEAERANHEQMRQQFKQLQQQPILDLNAMHAAHQQIEQKDAQLREQTATAWLNFYNGLNDQQKTTVSTALKQHFAKMEQR HDKMRERWEKHRGDEAASAVKP
Sequences:
>Translated_182_residues MSKKTSRFLAIAAASLALSLGSAFAAQPSDGPGGPGMGHGGPGWHHGGFMKELNQLHGQLKLNADQEKSWQAALDTMKQS HEAERANHEQMRQQFKQLQQQPILDLNAMHAAHQQIEQKDAQLREQTATAWLNFYNGLNDQQKTTVSTALKQHFAKMEQR HDKMRERWEKHRGDEAASAVKP >Mature_181_residues SKKTSRFLAIAAASLALSLGSAFAAQPSDGPGGPGMGHGGPGWHHGGFMKELNQLHGQLKLNADQEKSWQAALDTMKQSH EAERANHEQMRQQFKQLQQQPILDLNAMHAAHQQIEQKDAQLREQTATAWLNFYNGLNDQQKTTVSTALKQHFAKMEQRH DKMRERWEKHRGDEAASAVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20384; Mature: 20253
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTSRFLAIAAASLALSLGSAFAAQPSDGPGGPGMGHGGPGWHHGGFMKELNQLHGQL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC KLNADQEKSWQAALDTMKQSHEAERANHEQMRQQFKQLQQQPILDLNAMHAAHQQIEQKD CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AQLREQTATAWLNFYNGLNDQQKTTVSTALKQHFAKMEQRHDKMRERWEKHRGDEAASAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC KP CC >Mature Secondary Structure SKKTSRFLAIAAASLALSLGSAFAAQPSDGPGGPGMGHGGPGWHHGGFMKELNQLHGQL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC KLNADQEKSWQAALDTMKQSHEAERANHEQMRQQFKQLQQQPILDLNAMHAAHQQIEQKD CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AQLREQTATAWLNFYNGLNDQQKTTVSTALKQHFAKMEQRHDKMRERWEKHRGDEAASAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC KP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA