Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476905
Identifier: 186476905
GI number: 186476905
Start: 2414400
End: 2414954
Strand: Direct
Name: 186476905
Synonym: Bphy_2154
Alternate gene names: NA
Gene position: 2414400-2414954 (Clockwise)
Preceding gene: 186476904
Following gene: 186476908
Centisome position: 69.4
GC content: 68.65
Gene sequence:
>555_bases ATGAGCACGCGCGAGGCAATCGGACGCGTGAGCGGCGCAACGGCCGCGCGGCTCGCGCTAATCGGCGCGCTGTGCATCGG CGCGGGCGCCATCGTCAGCGGCTGCAGTTCGGCCTCCGTCGGTGCAGCGGCGGGCGCGGGCGCGGGCGCGGCGACAGGCA TCGTCACGGCCAACCCCGCGGTGGGAATCGGCGTCGGCATCGCGGTGCAGGCCGCCACCGACGCAGCCGTCGCGCGCTAT CTGCGCGTGATGCATACGGATCAGCAGAACGTGATCGCCGCGCTCGCGGGCGCGATGCCCGTTGGCGAAACACGCGACTG GAGCGTCAAGCACTCGCTTCCCATCGAGAACGGCCACGGCCAGGTACGCGTGACGCGCGCGTTCGCATCATCGCTCGCGA TCTGCAAGGAGTTCGTGTTTTCGGTCGTCGACGGGGACAAGCCCGACTCGAAGGTCTACTGGTACACGGCGAACGCCTGC CAGCAGGACAACAAGGGCTACTGGAAATGGGCATCGGCGGAACCGGCTGTCGCTCGCTGGGGCAATTTGCAGTAG
Upstream 100 bases:
>100_bases CCGCATCGAGCGCGTTCTATGTCGCCTCGATCTGCCGTGACGGCGGTGCTTGGAAGTGGGCGTCGGCCGAACCTGCAACC GAGCGCTGGGGCTCGCTGCA
Downstream 100 bases:
>100_bases CCACCACGCGTTGTACGGCGCGACAAACACAAAGGGGAGCCGCGGCTCCCCTTTTCCATTGCCCGCAAGCGCAAACGCAC GAGCCTCTTCAGGCCCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSTREAIGRVSGATAARLALIGALCIGAGAIVSGCSSASVGAAAGAGAGAATGIVTANPAVGIGVGIAVQAATDAAVARY LRVMHTDQQNVIAALAGAMPVGETRDWSVKHSLPIENGHGQVRVTRAFASSLAICKEFVFSVVDGDKPDSKVYWYTANAC QQDNKGYWKWASAEPAVARWGNLQ
Sequences:
>Translated_184_residues MSTREAIGRVSGATAARLALIGALCIGAGAIVSGCSSASVGAAAGAGAGAATGIVTANPAVGIGVGIAVQAATDAAVARY LRVMHTDQQNVIAALAGAMPVGETRDWSVKHSLPIENGHGQVRVTRAFASSLAICKEFVFSVVDGDKPDSKVYWYTANAC QQDNKGYWKWASAEPAVARWGNLQ >Mature_183_residues STREAIGRVSGATAARLALIGALCIGAGAIVSGCSSASVGAAAGAGAGAATGIVTANPAVGIGVGIAVQAATDAAVARYL RVMHTDQQNVIAALAGAMPVGETRDWSVKHSLPIENGHGQVRVTRAFASSLAICKEFVFSVVDGDKPDSKVYWYTANACQ QDNKGYWKWASAEPAVARWGNLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18744; Mature: 18613
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTREAIGRVSGATAARLALIGALCIGAGAIVSGCSSASVGAAAGAGAGAATGIVTANPA CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCC VGIGVGIAVQAATDAAVARYLRVMHTDQQNVIAALAGAMPVGETRDWSVKHSLPIENGHG CEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCC QVRVTRAFASSLAICKEFVFSVVDGDKPDSKVYWYTANACQQDNKGYWKWASAEPAVARW CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHCC GNLQ CCCC >Mature Secondary Structure STREAIGRVSGATAARLALIGALCIGAGAIVSGCSSASVGAAAGAGAGAATGIVTANPA CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCC VGIGVGIAVQAATDAAVARYLRVMHTDQQNVIAALAGAMPVGETRDWSVKHSLPIENGHG CEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCC QVRVTRAFASSLAICKEFVFSVVDGDKPDSKVYWYTANACQQDNKGYWKWASAEPAVARW CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHCC GNLQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA