The gene/protein map for NC_010622 is currently unavailable.
Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is (phzF1 [H]

Identifier: 186476872

GI number: 186476872

Start: 2377627

End: 2378517

Strand: Direct

Name: (phzF1 [H]

Synonym: Bphy_2119

Alternate gene names: 186476872

Gene position: 2377627-2378517 (Clockwise)

Preceding gene: 186476871

Following gene: 186476873

Centisome position: 68.34

GC content: 66.11

Gene sequence:

>891_bases
ATGCAAGGGAAAACCGTTCGCTTCAAACAGGTCGACGTGTTCACGTCGGTGCCGTTCAAAGGCAATCCCCTCGCGCTGAT
CTTCGATGCGGACGCACTCGATACCGAACAGATGCAGGCCATCGCGCACTGGACGAATCTGTCGGAGACCGCGTTCATGC
TAAAGCCGACCGACCCGTCGGCGGATTATCGCGTGCGCATCTTCACGACGCACGGCGAGTTGCCCTTCGCCGGCCATCCG
ACACTCGGGACGGCGCACGCGTGGCGCGAAGCAGGCAATCGGCCGAAGCAGCCCGGCCGCCTCGTGCAGCAATGCGCAGC
GGGCCTGATCGAACTGGAGCAAGACGATAGCCGCGCCGGCGTATGGTCGTTCGCCGCGCCGCCTGCGCGCGTCACGCCGC
TCGCCGAAACCGAATACGCCGCGCTTGCACTGGCGCTGCATAGCGATGCAATCGATTACACAGCCCAGCCGTGCGGCGTC
GACAATGGTCCGCAATGGCTCGTCGTCCGCATGAAATCGGCAGCGGCATGCCTCGCGCTCGATCCCGATTCAGCCGCGCT
TGCACGTGTCGTGCAGACCGTGGGGGCACGCGGCCTCGCCGCCTATGGCCCGCATGACGCGAACGGACCCGCGAACTATG
AATTGCGCTGTCTGATGCTGGGCGGTGGCCTCGGCATCGGGGAAGACCCGGTGACAGGCAGCGCTAACGCCGCGCTCGCC
AACCTGCTGACCATGCAGAATGCGCGGCCCGGCATGCAATACACGGTACGCCAGGGCACGGCGCTCGGCCGCGCGGGCGA
CGTCTACGTGCGCTACGACGACGCGGCGGACAAGACGTGGATTGGCGGTGCATCGCTGACTGTCGTTGACGGCGCGTTCC
GCCTGCCCTGA

Upstream 100 bases:

>100_bases
CCGTCGATGATGTGAAAGCGTTATCGGCGGCGTTTTTCATGGGCGTGTGGATCATGCCGCGCGTCAACCCCCGCTCAGCC
GTCGAACAGGAACGAAAACG

Downstream 100 bases:

>100_bases
ACCGGCGAGCGCGATGACCTTGAATGCGTGAGACGGGATTGACATGTGCGCGTCACCTGGATGTTCTAAAAATCCGTCCG
ATGCGCACACATACAATCTT

Product: PhzF family phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MQGKTVRFKQVDVFTSVPFKGNPLALIFDADALDTEQMQAIAHWTNLSETAFMLKPTDPSADYRVRIFTTHGELPFAGHP
TLGTAHAWREAGNRPKQPGRLVQQCAAGLIELEQDDSRAGVWSFAAPPARVTPLAETEYAALALALHSDAIDYTAQPCGV
DNGPQWLVVRMKSAAACLALDPDSAALARVVQTVGARGLAAYGPHDANGPANYELRCLMLGGGLGIGEDPVTGSANAALA
NLLTMQNARPGMQYTVRQGTALGRAGDVYVRYDDAADKTWIGGASLTVVDGAFRLP

Sequences:

>Translated_296_residues
MQGKTVRFKQVDVFTSVPFKGNPLALIFDADALDTEQMQAIAHWTNLSETAFMLKPTDPSADYRVRIFTTHGELPFAGHP
TLGTAHAWREAGNRPKQPGRLVQQCAAGLIELEQDDSRAGVWSFAAPPARVTPLAETEYAALALALHSDAIDYTAQPCGV
DNGPQWLVVRMKSAAACLALDPDSAALARVVQTVGARGLAAYGPHDANGPANYELRCLMLGGGLGIGEDPVTGSANAALA
NLLTMQNARPGMQYTVRQGTALGRAGDVYVRYDDAADKTWIGGASLTVVDGAFRLP
>Mature_296_residues
MQGKTVRFKQVDVFTSVPFKGNPLALIFDADALDTEQMQAIAHWTNLSETAFMLKPTDPSADYRVRIFTTHGELPFAGHP
TLGTAHAWREAGNRPKQPGRLVQQCAAGLIELEQDDSRAGVWSFAAPPARVTPLAETEYAALALALHSDAIDYTAQPCGV
DNGPQWLVVRMKSAAACLALDPDSAALARVVQTVGARGLAAYGPHDANGPANYELRCLMLGGGLGIGEDPVTGSANAALA
NLLTMQNARPGMQYTVRQGTALGRAGDVYVRYDDAADKTWIGGASLTVVDGAFRLP

Specific function: Isomerase that catalyzes the condensation of two molecules of trans-2,3-dihydro-3-hydroxyanthranilic acid (DHHA) into the phenazine ring system. The final product is not yet known [H]

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=296, Percent_Identity=33.1081081081081, Blast_Score=105, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6321818, Length=299, Percent_Identity=35.1170568561873, Blast_Score=173, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 31432; Mature: 31432

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKTVRFKQVDVFTSVPFKGNPLALIFDADALDTEQMQAIAHWTNLSETAFMLKPTDPS
CCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCC
ADYRVRIFTTHGELPFAGHPTLGTAHAWREAGNRPKQPGRLVQQCAAGLIELEQDDSRAG
CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCC
VWSFAAPPARVTPLAETEYAALALALHSDAIDYTAQPCGVDNGPQWLVVRMKSAAACLAL
EEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEE
DPDSAALARVVQTVGARGLAAYGPHDANGPANYELRCLMLGGGLGIGEDPVTGSANAALA
CCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHH
NLLTMQNARPGMQYTVRQGTALGRAGDVYVRYDDAADKTWIGGASLTVVDGAFRLP
HHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEECCCEEEEECCEECCC
>Mature Secondary Structure
MQGKTVRFKQVDVFTSVPFKGNPLALIFDADALDTEQMQAIAHWTNLSETAFMLKPTDPS
CCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCC
ADYRVRIFTTHGELPFAGHPTLGTAHAWREAGNRPKQPGRLVQQCAAGLIELEQDDSRAG
CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCC
VWSFAAPPARVTPLAETEYAALALALHSDAIDYTAQPCGVDNGPQWLVVRMKSAAACLAL
EEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEE
DPDSAALARVVQTVGARGLAAYGPHDANGPANYELRCLMLGGGLGIGEDPVTGSANAALA
CCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHH
NLLTMQNARPGMQYTVRQGTALGRAGDVYVRYDDAADKTWIGGASLTVVDGAFRLP
HHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEECCCEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]