Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010622 |
Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476866
Identifier: 186476866
GI number: 186476866
Start: 2369782
End: 2370048
Strand: Direct
Name: 186476866
Synonym: Bphy_2112
Alternate gene names: NA
Gene position: 2369782-2370048 (Clockwise)
Preceding gene: 186476859
Following gene: 186476869
Centisome position: 68.11
GC content: 64.79
Gene sequence:
>267_bases TTGATCGCCAACGACAAATCAACCTCGGACCGCATCGCACATCTCGCCGCCATCGTGCTACGACGCGCCAGCGCGTCGAC AACCGAAAAGGAACTCGCGGGTTCGGCGCTCGCGCAGCATCACAGCCGCAAACAGACGAGCGTCGCGATCGGCAAGCTCG CCGCGCATGTGCTCGCGGATCGTCACGCGTGTGCGGAAGCGAAAGAGCTGGCGGGTTCGGTGCTTGCGCAGGTACGTCAG CACGGACACGCATCGCCGGTGCGCTGA
Upstream 100 bases:
>100_bases TGTGTTTCAGGCATGTCCGCATCCGGCGTCCAGGGCAACCGGCGAACATGGAGCGCGAGCGCACGACGCTCGACTCTTCA ACCACCGCCAGGAGCCTCCA
Downstream 100 bases:
>100_bases CTTCGCGCGGCCGGCGTAGCAGGCAAAAAAATGCGCTGCCGAAGCAGCGCATTTTTACCATCCCGGACGGGTTATCGACG CAAACACATCAGCGCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MIANDKSTSDRIAHLAAIVLRRASASTTEKELAGSALAQHHSRKQTSVAIGKLAAHVLADRHACAEAKELAGSVLAQVRQ HGHASPVR
Sequences:
>Translated_88_residues MIANDKSTSDRIAHLAAIVLRRASASTTEKELAGSALAQHHSRKQTSVAIGKLAAHVLADRHACAEAKELAGSVLAQVRQ HGHASPVR >Mature_88_residues MIANDKSTSDRIAHLAAIVLRRASASTTEKELAGSALAQHHSRKQTSVAIGKLAAHVLADRHACAEAKELAGSVLAQVRQ HGHASPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9252; Mature: 9252
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIANDKSTSDRIAHLAAIVLRRASASTTEKELAGSALAQHHSRKQTSVAIGKLAAHVLAD CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHACAEAKELAGSVLAQVRQHGHASPVR HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIANDKSTSDRIAHLAAIVLRRASASTTEKELAGSALAQHHSRKQTSVAIGKLAAHVLAD CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHACAEAKELAGSVLAQVRQHGHASPVR HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA