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The map label for this gene is ydeK [H]

Identifier: 186476869

GI number: 186476869

Start: 2374714

End: 2375619

Strand: Direct

Name: ydeK [H]

Synonym: Bphy_2116

Alternate gene names: 186476869

Gene position: 2374714-2375619 (Clockwise)

Preceding gene: 186476866

Following gene: 186476870

Centisome position: 68.25

GC content: 67.66

Gene sequence:

>906_bases
ATGAAGCGCGAAACCCAAGGCATGCTGCTCGGCCTGATCGGCGTAATGATCTTCAGTCTGACGCTGCCGATGACCCGCAT
CGTCGTCGCCGAATTCAGCCCGCTGCTGAACGGCCTGGGCCGCGCGCTCGCCGCTTCCGTTCCCGCTGCGATATTGCTCG
CCATCCGCCGTGAAAGGCGGCCCACGTGGCCGCAGATCAAGAGTCTCGCCGTCGTGTCGCTCGGCGTGATCATCGCGTTT
CCGGTGTTTTCCGCGTGGGCGATGAAGAGCGTCCCCGCGTCGCACGGCGCCGTCGTCAACGGCTTGCAGCCGCTGTGCGT
CGCCATCTACGCCGCGTGGCTGTCGCACGAACGGCCGTCGAGGGCATTCTGGGCGAGCGCCGTCGCGGGCAGCGCAATCG
TCGTCGCGTTCGCGCTGCAGGCGGGCGGCGGCGCGTTCCAGGCGGGCGACCTGTTGATGCTCGTCGCGGTCGGAATCGGC
GCACTCGGCTATGCAGAAGGCGCACGGCTCGCGCGGCAGATCGGCGGCTGGCAGGTGATCTGCTGGGCGCTCGTCGTGTC
GGCGCCGTTTCTGCTCGTGCCCGTCGCGTGGCTCGGCTGGGAGCAGCACGCCGCCCATCCCGGCCCCGTCGCGCTGAAAA
CCTGGCTCGCGTTCGGCTACGTCACATTGTTCTCGCAGTTCATCGGCTTTTTCGCGTGGTATGCGGGCCTGGCAATGGGC
GGCATCGCGCGGGTCGGCCAGGTGCAGCTGCTGCAGATTTTCTTCACGATGGCGTTCTCCGCGCTGTTCTTCGGCGAGAA
CGTCACGCCTGTCACGTGGGTTTTCGCGGCTGCCGTGATCGCCACCGTGATGCTGGGCCGCAAGGCCACCGTACATACGG
CCGTACGGCCGGTTCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
AAAATACGGACGGCGCGCCTGCCCTCGCCGCCGACATCGAAACCCCGAGCGGGCTGCGCACGCTCAGATAGATCAAGCAC
CACATGGAGAACCAGAAGCA

Downstream 100 bases:

>100_bases
CGAGTTCGCGCGATAATCCCTGTTTTTGACCGACCACCTGATCCTGCTACACCGACGAGGAGACCATGAATCAAAGCGAC
CTCAATGCCCCGACCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKRETQGMLLGLIGVMIFSLTLPMTRIVVAEFSPLLNGLGRALAASVPAAILLAIRRERRPTWPQIKSLAVVSLGVIIAF
PVFSAWAMKSVPASHGAVVNGLQPLCVAIYAAWLSHERPSRAFWASAVAGSAIVVAFALQAGGGAFQAGDLLMLVAVGIG
ALGYAEGARLARQIGGWQVICWALVVSAPFLLVPVAWLGWEQHAAHPGPVALKTWLAFGYVTLFSQFIGFFAWYAGLAMG
GIARVGQVQLLQIFFTMAFSALFFGENVTPVTWVFAAAVIATVMLGRKATVHTAVRPVRAA

Sequences:

>Translated_301_residues
MKRETQGMLLGLIGVMIFSLTLPMTRIVVAEFSPLLNGLGRALAASVPAAILLAIRRERRPTWPQIKSLAVVSLGVIIAF
PVFSAWAMKSVPASHGAVVNGLQPLCVAIYAAWLSHERPSRAFWASAVAGSAIVVAFALQAGGGAFQAGDLLMLVAVGIG
ALGYAEGARLARQIGGWQVICWALVVSAPFLLVPVAWLGWEQHAAHPGPVALKTWLAFGYVTLFSQFIGFFAWYAGLAMG
GIARVGQVQLLQIFFTMAFSALFFGENVTPVTWVFAAAVIATVMLGRKATVHTAVRPVRAA
>Mature_301_residues
MKRETQGMLLGLIGVMIFSLTLPMTRIVVAEFSPLLNGLGRALAASVPAAILLAIRRERRPTWPQIKSLAVVSLGVIIAF
PVFSAWAMKSVPASHGAVVNGLQPLCVAIYAAWLSHERPSRAFWASAVAGSAIVVAFALQAGGGAFQAGDLLMLVAVGIG
ALGYAEGARLARQIGGWQVICWALVVSAPFLLVPVAWLGWEQHAAHPGPVALKTWLAFGYVTLFSQFIGFFAWYAGLAMG
GIARVGQVQLLQIFFTMAFSALFFGENVTPVTWVFAAAVIATVMLGRKATVHTAVRPVRAA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31939; Mature: 31939

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRETQGMLLGLIGVMIFSLTLPMTRIVVAEFSPLLNGLGRALAASVPAAILLAIRRERR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTWPQIKSLAVVSLGVIIAFPVFSAWAMKSVPASHGAVVNGLQPLCVAIYAAWLSHERPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCC
RAFWASAVAGSAIVVAFALQAGGGAFQAGDLLMLVAVGIGALGYAEGARLARQIGGWQVI
HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CWALVVSAPFLLVPVAWLGWEQHAAHPGPVALKTWLAFGYVTLFSQFIGFFAWYAGLAMG
HHHHHHHCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIARVGQVQLLQIFFTMAFSALFFGENVTPVTWVFAAAVIATVMLGRKATVHTAVRPVRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MKRETQGMLLGLIGVMIFSLTLPMTRIVVAEFSPLLNGLGRALAASVPAAILLAIRRERR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTWPQIKSLAVVSLGVIIAFPVFSAWAMKSVPASHGAVVNGLQPLCVAIYAAWLSHERPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCC
RAFWASAVAGSAIVVAFALQAGGGAFQAGDLLMLVAVGIGALGYAEGARLARQIGGWQVI
HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CWALVVSAPFLLVPVAWLGWEQHAAHPGPVALKTWLAFGYVTLFSQFIGFFAWYAGLAMG
HHHHHHHCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIARVGQVQLLQIFFTMAFSALFFGENVTPVTWVFAAAVIATVMLGRKATVHTAVRPVRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]