Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is phnB [H]
Identifier: 186476859
GI number: 186476859
Start: 2363595
End: 2364029
Strand: Direct
Name: phnB [H]
Synonym: Bphy_2105
Alternate gene names: 186476859
Gene position: 2363595-2364029 (Clockwise)
Preceding gene: 186476858
Following gene: 186476866
Centisome position: 67.94
GC content: 59.77
Gene sequence:
>435_bases ATGCAAGTCCAACCCTACCTTTTCTTCAATGGCCGTTGCGAGGAAGCGCTGAAGTTCTACGGCGACAAGCTTGGCGCCGA AGTGATCTTCCAGATGCGCTTCAAGGACGCACCGCCGAATCCGCAGCAACCCATCCGTCCGGGCACCGAAAACAAGATCA TGCATTGCACGTTTCGCATCGGTTCGACGGAACTGATGGCGTCGGACGGCAATTGCGACGAAACGCCGGGCACGCACACG GGCTATGGCCTGTCGATCACCGTCGACGATCCGTCGCAGGGCGAAACCACCTTCAACGCGATGGCCGATGGCGGCAACGT CGTGATGCCGTGGCAGCCCACCTTCTGGAGCACGGGCTTCGGCATGGTCGTCGACAGATTCGGCGTGATGTGGATGATCA CCAATCCGCATGACGGCGACAAACACCCGAGCTGA
Upstream 100 bases:
>100_bases TCAACACAGTTTCACATTCGACGCGGCAGCGACGACTACAATCGTTGGCACGCGTGCGTTCGGTTTCGCATCGAACGGCG CGTCAACGAAGGAGACATCG
Downstream 100 bases:
>100_bases CGTGGCCATTCGCGGTTAGCGCGCCGCCGCTGCGCGCCCGCCGCCTTCGATGTTCCAGTTCGCCTCCGTGGCCGCCAGCA GTGCGCGCATGCGCTCCACC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MQVQPYLFFNGRCEEALKFYGDKLGAEVIFQMRFKDAPPNPQQPIRPGTENKIMHCTFRIGSTELMASDGNCDETPGTHT GYGLSITVDDPSQGETTFNAMADGGNVVMPWQPTFWSTGFGMVVDRFGVMWMITNPHDGDKHPS
Sequences:
>Translated_144_residues MQVQPYLFFNGRCEEALKFYGDKLGAEVIFQMRFKDAPPNPQQPIRPGTENKIMHCTFRIGSTELMASDGNCDETPGTHT GYGLSITVDDPSQGETTFNAMADGGNVVMPWQPTFWSTGFGMVVDRFGVMWMITNPHDGDKHPS >Mature_144_residues MQVQPYLFFNGRCEEALKFYGDKLGAEVIFQMRFKDAPPNPQQPIRPGTENKIMHCTFRIGSTELMASDGNCDETPGTHT GYGLSITVDDPSQGETTFNAMADGGNVVMPWQPTFWSTGFGMVVDRFGVMWMITNPHDGDKHPS
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=139, Percent_Identity=33.8129496402878, Blast_Score=93, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16027; Mature: 16027
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVQPYLFFNGRCEEALKFYGDKLGAEVIFQMRFKDAPPNPQQPIRPGTENKIMHCTFRI CCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEE GSTELMASDGNCDETPGTHTGYGLSITVDDPSQGETTFNAMADGGNVVMPWQPTFWSTGF CCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCH GMVVDRFGVMWMITNPHDGDKHPS HHHHHCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MQVQPYLFFNGRCEEALKFYGDKLGAEVIFQMRFKDAPPNPQQPIRPGTENKIMHCTFRI CCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEE GSTELMASDGNCDETPGTHTGYGLSITVDDPSQGETTFNAMADGGNVVMPWQPTFWSTGF CCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCH GMVVDRFGVMWMITNPHDGDKHPS HHHHHCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]