Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476735
Identifier: 186476735
GI number: 186476735
Start: 2231227
End: 2231742
Strand: Direct
Name: 186476735
Synonym: Bphy_1980
Alternate gene names: NA
Gene position: 2231227-2231742 (Clockwise)
Preceding gene: 186476732
Following gene: 186476736
Centisome position: 64.13
GC content: 66.47
Gene sequence:
>516_bases ATGCCCGAAACCCCTGCCTCGCCTGAACAGAACGCGCCTGCTGCCATGCTCGCGGCCGTGCCCGCCGTCGTGCTTGATTC GAACGTGTGGATCGACATTCTCGTGTTCGACGATCCCCACACGCGCCCCATTCTCGCCGCGCTCGAAAGCGGCGCACTGC GCGCGCTGATCGACGCACGGTGTCTCGCCGAGCTGACGCATGTGCTCGATTATCCGCAGTTCGAGAAGCGCGCCGTCGAC AAGGCCGCTGCGCTGGCGACGGTCGCGCGCCTCTCGACGTTCGTCCAGCCCGCGCCCGCCGAAGACGCGCGCCCGCTGCC CAAATGCAAGGACCGCGACGATCAGAAGTTTCTCGAGCTCGCGCATGCGATGCAGGCGGACTGGCTGGTCTCGAAGGATC GCGCGGTACTGAGGATGGCAAGGCGGATTGCGCGCGACTTCGGTTTCCGGATCGCACAGCCCGCGCCGTTCGTCGCCGAA TGTGCGTTGACAGCCGAAGAAGCCGCGCAAGCCTGA
Upstream 100 bases:
>100_bases TCTCGTAGTCGAGCGATTTGGCCGGCGACAGAACGATTATCATAGAGGCTTTCAGGCACGCCGTGCCTGGCGGTCAAAGA CGAAAGCCAGATTGTAACGA
Downstream 100 bases:
>100_bases CGCCCGCAAGACGCTACGCAATTCATACGCGCAGTCCCGCACACTCAACCGCCGCGCCCTTTTTCCCTACAATCGACATG AACGCACCGCACGATCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDARCLAELTHVLDYPQFEKRAVD KAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLELAHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAE CALTAEEAAQA
Sequences:
>Translated_171_residues MPETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDARCLAELTHVLDYPQFEKRAVD KAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLELAHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAE CALTAEEAAQA >Mature_170_residues PETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDARCLAELTHVLDYPQFEKRAVDK AAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLELAHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAEC ALTAEEAAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18637; Mature: 18505
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDAR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHH CLAELTHVLDYPQFEKRAVDKAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLEL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH AHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAECALTAEEAAQA HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDAR CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHH CLAELTHVLDYPQFEKRAVDKAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLEL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH AHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAECALTAEEAAQA HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA