Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476732
Identifier: 186476732
GI number: 186476732
Start: 2228399
End: 2229058
Strand: Direct
Name: 186476732
Synonym: Bphy_1977
Alternate gene names: NA
Gene position: 2228399-2229058 (Clockwise)
Preceding gene: 186476731
Following gene: 186476735
Centisome position: 64.05
GC content: 60.45
Gene sequence:
>660_bases ATGGATCGCACGAACGCACCGCGCCGATTGCCGCGGTTGGTCGGCCGGTTAGCGGTGTGGTTGGCGAGCGCATCGCTCGC TTGCACGCTGCCCGCTTTTGCCGATCAACTCGGACAGCACAACGACCTCGTCAACAAATTCGTCAACGATATGCATGCGG ATCCGCTTGTCGCGGACTGCGCCGCGCATGGCAATTTTGTCGCGAGCACATCGACGGCATTCGATCACGTCGAGTTCCCG CCCAGTTCGTTCGACAGCGCTCATGCGGCTGTCACACCCTGGAACGATTCGTTCGACGAAGGCAAGCAGAAGGTCAAGGT CGACAGCATTGTGACCGTCGAAGGTCTGGGCATTCCGCAAGCGGGCGGCGATCCATCACCACTCAAATTCCGCTGCGGCT ATGTCGGTGCGCAGATGCTCGCATTCAGCTGGAACGATCCCGTGCCGCCGCTGCGCGCGCACAGCGCCACGTCGTCGGGC TCTCACAGCGCGACGGGCAAACATGCCGTCAGCGGCAAGGGTTCGAAGAAGAACTCCGGCAAATCGACCAAGAGCTCGCC GAACAAGTCGGGCAACAAAAAGTCGGGCAAATCGTCCGGCAAGGCCGTGACGACCAAGAGCAGCAGCACGAAGAAGTCGA GCACAAAGAAGAAGCATTGA
Upstream 100 bases:
>100_bases CACACCACGACACGACAAAATATTTATGCCAGGATTGAACTCATTCCTGCCGACAGGCATCTTATGTGCCTGAAGTCTTC ATAGCATTGACCAAACATAG
Downstream 100 bases:
>100_bases TGCTGCTTGCGCCTTGTCCGAACATCGGACGGGGCACAGCGCATGATCAACAAAACGAGGCCACGCATTCCACGTGGCCT CGCTTTTTCGCATACCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDRTNAPRRLPRLVGRLAVWLASASLACTLPAFADQLGQHNDLVNKFVNDMHADPLVADCAAHGNFVASTSTAFDHVEFP PSSFDSAHAAVTPWNDSFDEGKQKVKVDSIVTVEGLGIPQAGGDPSPLKFRCGYVGAQMLAFSWNDPVPPLRAHSATSSG SHSATGKHAVSGKGSKKNSGKSTKSSPNKSGNKKSGKSSGKAVTTKSSSTKKSSTKKKH
Sequences:
>Translated_219_residues MDRTNAPRRLPRLVGRLAVWLASASLACTLPAFADQLGQHNDLVNKFVNDMHADPLVADCAAHGNFVASTSTAFDHVEFP PSSFDSAHAAVTPWNDSFDEGKQKVKVDSIVTVEGLGIPQAGGDPSPLKFRCGYVGAQMLAFSWNDPVPPLRAHSATSSG SHSATGKHAVSGKGSKKNSGKSTKSSPNKSGNKKSGKSSGKAVTTKSSSTKKSSTKKKH >Mature_219_residues MDRTNAPRRLPRLVGRLAVWLASASLACTLPAFADQLGQHNDLVNKFVNDMHADPLVADCAAHGNFVASTSTAFDHVEFP PSSFDSAHAAVTPWNDSFDEGKQKVKVDSIVTVEGLGIPQAGGDPSPLKFRCGYVGAQMLAFSWNDPVPPLRAHSATSSG SHSATGKHAVSGKGSKKNSGKSTKSSPNKSGNKKSGKSSGKAVTTKSSSTKKSSTKKKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22970; Mature: 22970
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTNAPRRLPRLVGRLAVWLASASLACTLPAFADQLGQHNDLVNKFVNDMHADPLVADC CCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH AAHGNFVASTSTAFDHVEFPPSSFDSAHAAVTPWNDSFDEGKQKVKVDSIVTVEGLGIPQ HHCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHEEECCEEEEEECCCCCC AGGDPSPLKFRCGYVGAQMLAFSWNDPVPPLRAHSATSSGSHSATGKHAVSGKGSKKNSG CCCCCCCEEEECCHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSTKSSPNKSGNKKSGKSSGKAVTTKSSSTKKSSTKKKH CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCC >Mature Secondary Structure MDRTNAPRRLPRLVGRLAVWLASASLACTLPAFADQLGQHNDLVNKFVNDMHADPLVADC CCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH AAHGNFVASTSTAFDHVEFPPSSFDSAHAAVTPWNDSFDEGKQKVKVDSIVTVEGLGIPQ HHCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHEEECCEEEEEECCCCCC AGGDPSPLKFRCGYVGAQMLAFSWNDPVPPLRAHSATSSGSHSATGKHAVSGKGSKKNSG CCCCCCCEEEECCHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSTKSSPNKSGNKKSGKSSGKAVTTKSSSTKKSSTKKKH CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA