Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476731
Identifier: 186476731
GI number: 186476731
Start: 2227508
End: 2228182
Strand: Direct
Name: 186476731
Synonym: Bphy_1976
Alternate gene names: NA
Gene position: 2227508-2228182 (Clockwise)
Preceding gene: 186476730
Following gene: 186476732
Centisome position: 64.02
GC content: 62.96
Gene sequence:
>675_bases ATGGGTTTCCTCTATACACCGCTTCCGTTGTGGGTCGCTGTCGGTGGCTGGATCGCCGCTGTGGCGCTGCTCGCACTCGC GCTTTGGAAGAACCCGTTCAGACGATTGCAGGAACCCGTGCTTCAGCACGTGTGGCTCGCGATCATCGTCGCCGTCTCGG TGCTGTGGGCAACCAATGCATGGCTCGAAGACGGCACGGTCATTCATCTGCTGGGTGCGACGCTCGTCGTCACGCTCTTC GACTGGGGCCTGGCGCTAATCGCGATGGCCATCGTCACGGGGCTCGCCGCGGTTGTCTTCGATGCACCTTGGCAAGGCAT TGCGCTCACGTTTCTCGTCTTCGGCGCCGTGCCCGTCGGAGTCTCGACGCTGCTGCAACGCGCGAGCATTGCCTGGCTGC CACGCAACCTCTTCATGTTCATCTTCGGCCAGGGCTTCGTGTCGCCGGCCATCGCGGTTTCAGTCGCGTCGGCGGTTGCG TTGGCAACACACATCGCGCTCGCCGACGGATCGATGTCCGTTATCCCCGCCGGCTATGCCTTTAGCGTGTTCCTGCTTGC GTCGGGAGAATCGTGGTTCACAGGTATGTCGACTGCGTTGATCGCGGTCTATCGTCCCGCGTGGGTCACCACCTACGATG TGCGCCGCTACCGTCTCGGCGGCCCGCGTACCTGA
Upstream 100 bases:
>100_bases GATGTAAAGGTCGAAAGGAATCTGATGTCAATCGACATTAAATCATCGCTGGCATGGAATCCGCTCACACGTTTCACCGT TCAACGAGTAATATGAAGAC
Downstream 100 bases:
>100_bases TCGCTTTTCGTTCGTGCATAGAGCAACGACATGGACCTGGCTCTGCCGGGTTCGTAGTCTCTTCATGCGTTCGCGCATCC ATGCACCATCCGCCGATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin Biosynthesis Protein CbiM Homolog
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGFLYTPLPLWVAVGGWIAAVALLALALWKNPFRRLQEPVLQHVWLAIIVAVSVLWATNAWLEDGTVIHLLGATLVVTLF DWGLALIAMAIVTGLAAVVFDAPWQGIALTFLVFGAVPVGVSTLLQRASIAWLPRNLFMFIFGQGFVSPAIAVSVASAVA LATHIALADGSMSVIPAGYAFSVFLLASGESWFTGMSTALIAVYRPAWVTTYDVRRYRLGGPRT
Sequences:
>Translated_224_residues MGFLYTPLPLWVAVGGWIAAVALLALALWKNPFRRLQEPVLQHVWLAIIVAVSVLWATNAWLEDGTVIHLLGATLVVTLF DWGLALIAMAIVTGLAAVVFDAPWQGIALTFLVFGAVPVGVSTLLQRASIAWLPRNLFMFIFGQGFVSPAIAVSVASAVA LATHIALADGSMSVIPAGYAFSVFLLASGESWFTGMSTALIAVYRPAWVTTYDVRRYRLGGPRT >Mature_223_residues GFLYTPLPLWVAVGGWIAAVALLALALWKNPFRRLQEPVLQHVWLAIIVAVSVLWATNAWLEDGTVIHLLGATLVVTLFD WGLALIAMAIVTGLAAVVFDAPWQGIALTFLVFGAVPVGVSTLLQRASIAWLPRNLFMFIFGQGFVSPAIAVSVASAVAL ATHIALADGSMSVIPAGYAFSVFLLASGESWFTGMSTALIAVYRPAWVTTYDVRRYRLGGPRT
Specific function: Unknown
COG id: COG3235
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24042; Mature: 23911
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLYTPLPLWVAVGGWIAAVALLALALWKNPFRRLQEPVLQHVWLAIIVAVSVLWATNA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WLEDGTVIHLLGATLVVTLFDWGLALIAMAIVTGLAAVVFDAPWQGIALTFLVFGAVPVG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VSTLLQRASIAWLPRNLFMFIFGQGFVSPAIAVSVASAVALATHIALADGSMSVIPAGYA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH FSVFLLASGESWFTGMSTALIAVYRPAWVTTYDVRRYRLGGPRT HEEEEEECCCHHHHHHHHHHHHHHCCCCEEEHHHHHEECCCCCC >Mature Secondary Structure GFLYTPLPLWVAVGGWIAAVALLALALWKNPFRRLQEPVLQHVWLAIIVAVSVLWATNA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WLEDGTVIHLLGATLVVTLFDWGLALIAMAIVTGLAAVVFDAPWQGIALTFLVFGAVPVG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VSTLLQRASIAWLPRNLFMFIFGQGFVSPAIAVSVASAVALATHIALADGSMSVIPAGYA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH FSVFLLASGESWFTGMSTALIAVYRPAWVTTYDVRRYRLGGPRT HEEEEEECCCHHHHHHHHHHHHHHCCCCEEEHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA