Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is yghZ [H]
Identifier: 186476717
GI number: 186476717
Start: 2206435
End: 2207406
Strand: Direct
Name: yghZ [H]
Synonym: Bphy_1962
Alternate gene names: 186476717
Gene position: 2206435-2207406 (Clockwise)
Preceding gene: 186476714
Following gene: 186476718
Centisome position: 63.42
GC content: 59.67
Gene sequence:
>972_bases ATGAACTACCGACGTCTCGGCCGTTCCGGCCTGCAAGTCAGCGAGCTGTCCATCGGCTCATGGGTGACTTACGGCAATCA GGTGGACCGGACGGCCGCACGGGAATCGCTGGCGGCCGCGCGCGACGCGGGCGTCAATTTCTTCGACAACGCCGAGGTCT ATGCGGGCGGCAAGTCCGAACAGATCATGGGGGAAGCGCTGAAAGAATTGAACTGGCCGCGCGTGAGCTACATCGTTTCG ACGAAATTCTTCTGGGGCCTCAATGAGGCGCCGAACCAGTATCACACGCTGAACCGCAAGTATCTGATGAACGCGATCGA CCACTCGCTCAAGCGTCTGCAGCTCGATTATGTTGATCTGGTGTTCTGTCATCGTCCTGATCCGTACACGCCGATCGAAG AAACGGTGTGGGCGATGAGTGACATGATCACGCGCGGCAAGGCGCTTTACTGGGGCTCGTCCGAATGGAGCGCCGATGAA ATTCGCGCGGCCTATGAGATTGCCGAACGTCATCATCTGCACAAGCCAGTGATGGAGCAGCCGCAATACAACCTGTTCCA TCGCAAGCGCGTGGAGCAGGAATACCGGCGGCTTTATGAAGACATCGGCCTGGGTCTGACCACGTGGAGTCCGCTTGCCT CCGGTCTGCTGACGGGCAAGTATCGCAACGGGGTGCCTGCCGGCAGCCGCGCGGAGCTGCAAGGCTACGACTGGCTGCGC AAGGAACTGACCGACTCGGGCAAGAACAGCGTCGTCGGCCAGTTGGGCAATCTCGCGGACGAACTTGGCTGCACCGTTGG GCAACTGGCGCTCGCATGGATCCTGACCAATCCGAACGTCAGCACGATCATCACTGGCGCATCGCGCGTCGAGCAGATCA CGGAAAACATGAAGGCGAAGGACGTGGCCGAGCAGATCACGCCCGAGATCAAGGAGAAGATCGAAGCGATCGTCGGCGAC CTTTATCAGTGA
Upstream 100 bases:
>100_bases TGCATGAAGCGACGCGAACTACACACCCAAAGGCACGCCTCGCCGATTCGGATTAATGTGTGGGGTTCCGGCTACGACAC CTCAGAAAAGGAGAAACTGG
Downstream 100 bases:
>100_bases TGGCCGAGGCGCCGCGCGGCCGGGTCACTGACGCGCGCGGCCCGCGCCGCAAACAGAGTTGGCAGGTCGCGTACAATACG CAGCCCCAACGTCTGACCGT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MNYRRLGRSGLQVSELSIGSWVTYGNQVDRTAARESLAAARDAGVNFFDNAEVYAGGKSEQIMGEALKELNWPRVSYIVS TKFFWGLNEAPNQYHTLNRKYLMNAIDHSLKRLQLDYVDLVFCHRPDPYTPIEETVWAMSDMITRGKALYWGSSEWSADE IRAAYEIAERHHLHKPVMEQPQYNLFHRKRVEQEYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPAGSRAELQGYDWLR KELTDSGKNSVVGQLGNLADELGCTVGQLALAWILTNPNVSTIITGASRVEQITENMKAKDVAEQITPEIKEKIEAIVGD LYQ
Sequences:
>Translated_323_residues MNYRRLGRSGLQVSELSIGSWVTYGNQVDRTAARESLAAARDAGVNFFDNAEVYAGGKSEQIMGEALKELNWPRVSYIVS TKFFWGLNEAPNQYHTLNRKYLMNAIDHSLKRLQLDYVDLVFCHRPDPYTPIEETVWAMSDMITRGKALYWGSSEWSADE IRAAYEIAERHHLHKPVMEQPQYNLFHRKRVEQEYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPAGSRAELQGYDWLR KELTDSGKNSVVGQLGNLADELGCTVGQLALAWILTNPNVSTIITGASRVEQITENMKAKDVAEQITPEIKEKIEAIVGD LYQ >Mature_323_residues MNYRRLGRSGLQVSELSIGSWVTYGNQVDRTAARESLAAARDAGVNFFDNAEVYAGGKSEQIMGEALKELNWPRVSYIVS TKFFWGLNEAPNQYHTLNRKYLMNAIDHSLKRLQLDYVDLVFCHRPDPYTPIEETVWAMSDMITRGKALYWGSSEWSADE IRAAYEIAERHHLHKPVMEQPQYNLFHRKRVEQEYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPAGSRAELQGYDWLR KELTDSGKNSVVGQLGNLADELGCTVGQLALAWILTNPNVSTIITGASRVEQITENMKAKDVAEQITPEIKEKIEAIVGD LYQ
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=45.2012383900929, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=45.1713395638629, Blast_Score=302, Evalue=3e-82, Organism=Homo sapiens, GI27436964, Length=321, Percent_Identity=45.1713395638629, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI27436962, Length=321, Percent_Identity=45.1713395638629, Blast_Score=295, Evalue=5e-80, Organism=Homo sapiens, GI27436966, Length=321, Percent_Identity=44.8598130841121, Blast_Score=293, Evalue=1e-79, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=45.5108359133127, Blast_Score=292, Evalue=3e-79, Organism=Homo sapiens, GI41152114, Length=294, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI223718702, Length=291, Percent_Identity=26.4604810996564, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI41327764, Length=291, Percent_Identity=27.4914089347079, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1789375, Length=319, Percent_Identity=35.7366771159875, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI87081735, Length=335, Percent_Identity=35.8208955223881, Blast_Score=170, Evalue=9e-44, Organism=Escherichia coli, GI1788070, Length=315, Percent_Identity=31.1111111111111, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=27.9538904899135, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788081, Length=284, Percent_Identity=24.6478873239437, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=331, Percent_Identity=25.3776435045317, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6323998, Length=332, Percent_Identity=25.6024096385542, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319958, Length=298, Percent_Identity=24.496644295302, Blast_Score=76, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=341, Percent_Identity=23.7536656891496, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24640980, Length=340, Percent_Identity=30.5882352941176, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI45549126, Length=340, Percent_Identity=30.5882352941176, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI24646155, Length=309, Percent_Identity=27.5080906148867, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24646159, Length=227, Percent_Identity=27.7533039647577, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36580; Mature: 36580
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRRLGRSGLQVSELSIGSWVTYGNQVDRTAARESLAAARDAGVNFFDNAEVYAGGKSE CCHHHHCCCCCEEEHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHH QIMGEALKELNWPRVSYIVSTKFFWGLNEAPNQYHTLNRKYLMNAIDHSLKRLQLDYVDL HHHHHHHHHCCCCHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VFCHRPDPYTPIEETVWAMSDMITRGKALYWGSSEWSADEIRAAYEIAERHHLHKPVMEQ EEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCC PQYNLFHRKRVEQEYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPAGSRAELQGYDWLR CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH KELTDSGKNSVVGQLGNLADELGCTVGQLALAWILTNPNVSTIITGASRVEQITENMKAK HHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHH DVAEQITPEIKEKIEAIVGDLYQ HHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYRRLGRSGLQVSELSIGSWVTYGNQVDRTAARESLAAARDAGVNFFDNAEVYAGGKSE CCHHHHCCCCCEEEHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHH QIMGEALKELNWPRVSYIVSTKFFWGLNEAPNQYHTLNRKYLMNAIDHSLKRLQLDYVDL HHHHHHHHHCCCCHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VFCHRPDPYTPIEETVWAMSDMITRGKALYWGSSEWSADEIRAAYEIAERHHLHKPVMEQ EEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCC PQYNLFHRKRVEQEYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPAGSRAELQGYDWLR CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH KELTDSGKNSVVGQLGNLADELGCTVGQLALAWILTNPNVSTIITGASRVEQITENMKAK HHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHH DVAEQITPEIKEKIEAIVGDLYQ HHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]