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The map label for this gene is 186476700

Identifier: 186476700

GI number: 186476700

Start: 2190208

End: 2190945

Strand: Direct

Name: 186476700

Synonym: Bphy_1945

Alternate gene names: NA

Gene position: 2190208-2190945 (Clockwise)

Preceding gene: 186476699

Following gene: 186476701

Centisome position: 62.95

GC content: 68.43

Gene sequence:

>738_bases
ATGCAGGCCACGCCCTCTTTTCCACCCGGTTTCACGCCGGAAGCTTCCGCCCGAATCAATCCGCGTGTCGCCACGGTGAC
GGGGATCGTCATCGGGCTTCATGTCGTCGGGCTTGCGATTGCCTTGGCGGTACGGGACGTGCCGCCGCTGCCTGTCGAGA
CGCAGCGTACGATCACGGCAGAATTGCTGCCGCCGCCTGCGCCCGCCGCCGCGCCCGTCGCGATCGAATCGGCCCCGCCG
CCGAAGCCCGTCCCTGTGCAGAAGGTCAAGCCGAAGGTGCAGCCGCGCCCGACGCCGAAGCCCGCGCCAGCGCCGATGCC
CGTCGCTCAGGCACCATCGCAGCACGAAATCAGCGCGCCCGAAACGGCGCCGACGCCGCCCGCGCCACCCGCACCGGCAC
CCGTCGCGCCTGCGGCGCCCGCGGCGCCGGCAGCAAAGCCCGTCATGTCGATCACTGCACCGAAGGACGCATCGCATCTG
AGTTGCAGCATCGTCGAGCCCGCCTATCCGGCAATGTCGCGCCGACGCGGCGAAACGGGACGCGCTGTGGTCCAGTTCAT
CCTCTCGGCGTCCGGCCGGATCGAAAACGTCGAACTGAAAAAGAGCAGCGGCTACGAACGCCTCGACCAGGCCGCGCTCG
ACGCGATTCGATCCAGTTCGTGCAAGCCCTATGTGGTGGACGGCGAAGCGACGCGCGTGCCTGCCGTCCAGCCGTTCGAC
TTCAGCCTGAACAACTGA

Upstream 100 bases:

>100_bases
ATCGGTTTTCTGACCACCGTTTGTATTTCGTTGCTGATATTCCGAACATGACGCTGTTTCGCATGACGTGCTGCATCGAC
GGCGCGCCGCCACGCTGACC

Downstream 100 bases:

>100_bases
TCCGCCGGAAAAGATTTCAAAGAAGAAAAGGAATTGCCATGCAGAATTACGGTATCGCCCACGTCTGGGCTCAAGGGGAT
TTCGTCACACGCGGTATCGC

Product: TonB family protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB-Like Protein; NB-Like; NB Like Protein; NB C-Terminal; NB-Like Protein Links Inner And Outer Membranes; Periplasmic Protein nB

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MQATPSFPPGFTPEASARINPRVATVTGIVIGLHVVGLAIALAVRDVPPLPVETQRTITAELLPPPAPAAAPVAIESAPP
PKPVPVQKVKPKVQPRPTPKPAPAPMPVAQAPSQHEISAPETAPTPPAPPAPAPVAPAAPAAPAAKPVMSITAPKDASHL
SCSIVEPAYPAMSRRRGETGRAVVQFILSASGRIENVELKKSSGYERLDQAALDAIRSSSCKPYVVDGEATRVPAVQPFD
FSLNN

Sequences:

>Translated_245_residues
MQATPSFPPGFTPEASARINPRVATVTGIVIGLHVVGLAIALAVRDVPPLPVETQRTITAELLPPPAPAAAPVAIESAPP
PKPVPVQKVKPKVQPRPTPKPAPAPMPVAQAPSQHEISAPETAPTPPAPPAPAPVAPAAPAAPAAKPVMSITAPKDASHL
SCSIVEPAYPAMSRRRGETGRAVVQFILSASGRIENVELKKSSGYERLDQAALDAIRSSSCKPYVVDGEATRVPAVQPFD
FSLNN
>Mature_245_residues
MQATPSFPPGFTPEASARINPRVATVTGIVIGLHVVGLAIALAVRDVPPLPVETQRTITAELLPPPAPAAAPVAIESAPP
PKPVPVQKVKPKVQPRPTPKPAPAPMPVAQAPSQHEISAPETAPTPPAPPAPAPVAPAAPAAPAAKPVMSITAPKDASHL
SCSIVEPAYPAMSRRRGETGRAVVQFILSASGRIENVELKKSSGYERLDQAALDAIRSSSCKPYVVDGEATRVPAVQPFD
FSLNN

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25322; Mature: 25322

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATPSFPPGFTPEASARINPRVATVTGIVIGLHVVGLAIALAVRDVPPLPVETQRTITA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
ELLPPPAPAAAPVAIESAPPPKPVPVQKVKPKVQPRPTPKPAPAPMPVAQAPSQHEISAP
ECCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETAPTPPAPPAPAPVAPAAPAAPAAKPVMSITAPKDASHLSCSIVEPAYPAMSRRRGETG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHCCCHH
RAVVQFILSASGRIENVELKKSSGYERLDQAALDAIRSSSCKPYVVDGEATRVPAVQPFD
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
FSLNN
CCCCC
>Mature Secondary Structure
MQATPSFPPGFTPEASARINPRVATVTGIVIGLHVVGLAIALAVRDVPPLPVETQRTITA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
ELLPPPAPAAAPVAIESAPPPKPVPVQKVKPKVQPRPTPKPAPAPMPVAQAPSQHEISAP
ECCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETAPTPPAPPAPAPVAPAAPAAPAAKPVMSITAPKDASHLSCSIVEPAYPAMSRRRGETG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHCCCHH
RAVVQFILSASGRIENVELKKSSGYERLDQAALDAIRSSSCKPYVVDGEATRVPAVQPFD
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
FSLNN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA