Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476671
Identifier: 186476671
GI number: 186476671
Start: 2162800
End: 2163777
Strand: Direct
Name: 186476671
Synonym: Bphy_1916
Alternate gene names: NA
Gene position: 2162800-2163777 (Clockwise)
Preceding gene: 186476670
Following gene: 186476672
Centisome position: 62.16
GC content: 67.28
Gene sequence:
>978_bases ATGCCAATGAGAGCGCAACCAGCATTACTCGCAGTCCCGGCGACCCTGACTGCTGCGTGTCTGTCAGTAATGGCAGGCTG GCAGCGTGGCGGGTTTCTGGCTGAGCGGGTGCTCTGGATCGCCGTCGGCGTCGTGCTGCTTGTCGCCGCTCACCTGCTCC CTGCCCTGATCCGTTCGCATGGCCGGCGTATCCGGTTTGTCGGCGTCCTGCTCTGGATCGGCTGCATGGCGGCCACCTGC TACGGGCACGCGGTCTTTTTCCTCCTGGCTCAGAAGCATGCTGGCGAGGTGCGTGCGGCAGCAGTCCCGGCAGTCACGAC GACCGGCCGTAACCCGGCAGTCATCGCCGCCGACCGCGCTGCGCTCGTATCGCGACTGGCCCGAGCTACCGAACGCCGCT GTGCCGAACCGTGCCCGAGCCTGCGCATCGAGCGCGCGTCGCTTGCTGCTCGGCTGGATGCGATCGATGCCGAAGCAGCA CAGGCGAAGCGTCAGGAATCCGCGCAGGACCGCGCCGACGCCGCGCGCGCCGCTGCCGTCGCTGATCCTGTGACGGGCGC CGTGACCGCGTTCGGCATCCCGTCGGGTCGCGTCGATCTGCTCGCCGGTCTCGCTTTCGCGGCAGTACTCGAAGCAGTCG CGTGCTTCTGCTGGCTGCTCGCGCTGCGCCCGGTCGAATCGCTCAAACCCAATACTGGCGCGGCAGTAACGCCAGTCACG AACATCAAGTCACCAGTCGTGACCGAGTATCGCGGCTACGTTCCGGACGCCAACGGCCCGTTACCACCGCCGCCGCAACC CGTCGCAGCCGTCATCGAAGCGCCCGACGACGCCGCGCGCGTACTCGCCGAGATTGCCGCTGGGCGGATGCGCGGCACGG TCGCGGAAATCAGGAAGTTCCTCGGCAAGTCACAGGCGCACGCGGCAGCAGTACGGAAGCAAATCAGCGGGCCGGCGCAA CCGGCAATCAACCAATAA
Upstream 100 bases:
>100_bases TCCGGACGCTGTGGGACAGCATCAACGCCGCTCGCGGGTTCGGTTGGGATGCTAACCCGTGGGTCTGGGTCGTCGAATTC AAGCGGACCGGGGCGTGACC
Downstream 100 bases:
>100_bases CCGAAAACATGAAACGCGATCTGATCAGCTTGCCGCTGGACCTCGGGAGCGAACTTATCATCGACAACTTCGCTGGCGGC GGTGGTGCGAGCACCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPMRAQPALLAVPATLTAACLSVMAGWQRGGFLAERVLWIAVGVVLLVAAHLLPALIRSHGRRIRFVGVLLWIGCMAATC YGHAVFFLLAQKHAGEVRAAAVPAVTTTGRNPAVIAADRAALVSRLARATERRCAEPCPSLRIERASLAARLDAIDAEAA QAKRQESAQDRADAARAAAVADPVTGAVTAFGIPSGRVDLLAGLAFAAVLEAVACFCWLLALRPVESLKPNTGAAVTPVT NIKSPVVTEYRGYVPDANGPLPPPPQPVAAVIEAPDDAARVLAEIAAGRMRGTVAEIRKFLGKSQAHAAAVRKQISGPAQ PAINQ
Sequences:
>Translated_325_residues MPMRAQPALLAVPATLTAACLSVMAGWQRGGFLAERVLWIAVGVVLLVAAHLLPALIRSHGRRIRFVGVLLWIGCMAATC YGHAVFFLLAQKHAGEVRAAAVPAVTTTGRNPAVIAADRAALVSRLARATERRCAEPCPSLRIERASLAARLDAIDAEAA QAKRQESAQDRADAARAAAVADPVTGAVTAFGIPSGRVDLLAGLAFAAVLEAVACFCWLLALRPVESLKPNTGAAVTPVT NIKSPVVTEYRGYVPDANGPLPPPPQPVAAVIEAPDDAARVLAEIAAGRMRGTVAEIRKFLGKSQAHAAAVRKQISGPAQ PAINQ >Mature_324_residues PMRAQPALLAVPATLTAACLSVMAGWQRGGFLAERVLWIAVGVVLLVAAHLLPALIRSHGRRIRFVGVLLWIGCMAATCY GHAVFFLLAQKHAGEVRAAAVPAVTTTGRNPAVIAADRAALVSRLARATERRCAEPCPSLRIERASLAARLDAIDAEAAQ AKRQESAQDRADAARAAAVADPVTGAVTAFGIPSGRVDLLAGLAFAAVLEAVACFCWLLALRPVESLKPNTGAAVTPVTN IKSPVVTEYRGYVPDANGPLPPPPQPVAAVIEAPDDAARVLAEIAAGRMRGTVAEIRKFLGKSQAHAAAVRKQISGPAQP AINQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33858; Mature: 33727
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRAQPALLAVPATLTAACLSVMAGWQRGGFLAERVLWIAVGVVLLVAAHLLPALIRSH CCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRRIRFVGVLLWIGCMAATCYGHAVFFLLAQKHAGEVRAAAVPAVTTTGRNPAVIAADRA CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCEEEEHHHH ALVSRLARATERRCAEPCPSLRIERASLAARLDAIDAEAAQAKRQESAQDRADAARAAAV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADPVTGAVTAFGIPSGRVDLLAGLAFAAVLEAVACFCWLLALRPVESLKPNTGAAVTPVT HCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEECCHH NIKSPVVTEYRGYVPDANGPLPPPPQPVAAVIEAPDDAARVLAEIAAGRMRGTVAEIRKF CCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH LGKSQAHAAAVRKQISGPAQPAINQ HCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PMRAQPALLAVPATLTAACLSVMAGWQRGGFLAERVLWIAVGVVLLVAAHLLPALIRSH CCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRRIRFVGVLLWIGCMAATCYGHAVFFLLAQKHAGEVRAAAVPAVTTTGRNPAVIAADRA CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCEEEEHHHH ALVSRLARATERRCAEPCPSLRIERASLAARLDAIDAEAAQAKRQESAQDRADAARAAAV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADPVTGAVTAFGIPSGRVDLLAGLAFAAVLEAVACFCWLLALRPVESLKPNTGAAVTPVT HCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEECCHH NIKSPVVTEYRGYVPDANGPLPPPPQPVAAVIEAPDDAARVLAEIAAGRMRGTVAEIRKF CCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH LGKSQAHAAAVRKQISGPAQPAINQ HCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA