Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is kgtP [H]
Identifier: 186475985
GI number: 186475985
Start: 1373764
End: 1375059
Strand: Reverse
Name: kgtP [H]
Synonym: Bphy_1226
Alternate gene names: 186475985
Gene position: 1375059-1373764 (Counterclockwise)
Preceding gene: 186475986
Following gene: 186475982
Centisome position: 39.52
GC content: 62.11
Gene sequence:
>1296_bases ATGACCGATACGACCGTCTTCACGCCCTCCGACACCCGTCGACGCATCTTCGCGATCGTCGGCGCTTCGTCCGGCAATCT CGTCGAGTGGTTCGATTTCTACGTCTACTCGTTTTGCGCACTGTACTTCGCACCCGCGTTTTTCCCGAAAGGCGATACGA CAGCGCAGTTGCTGAATACGGCAGGCGTGTTCGCCGCGGGCTTCCTGATGCGCCCGATCGGCGGCTGGTTCTTCGGCCGT CTCGCCGACAAGCGCGGCCGCCGTTTCGCGATGATGGTGTCTGTATTCATGATGTGCGGCGGTTCGCTCGTGATTGCCGC GTTGCCCACTTATGCGCAGATCGGCGCGCTCGCGCCTGCGTTGCTGCTGGTCGCGCGTCTGTTTCAGGGCCTGTCGGTGG GCGGCGAATATGGCACCAGCGCAACGTACATGAGTGAAGTCGCGTTGAAGGGGCGTCGCGGCTTCTTCGCGTCGTTCCAG TACGTGACGCTGATCGGCGGGCAACTGTTCGCGTTGCTCGTGCTCGTGATCCTGCAACAGCTGCTGACGACGGAAGAGCT GAAGGCGTGGGGCTGGCGTATTCCGTTCGTGGTCGGCGCGCTGGCCGCGCTGGTCGCGCTGTATCTGCGCCGCTCGCTCG ACGAAACGACCACGGCCGAGACGCGTCAGCGCAAGGAAGCGGGCACGCTGCGCGGCATGTGGAAGCACAAGGGCGCTTTC TTCACGGTGCTCGGCTTTACGGCGGGCGGTTCGCTGATTTTCTACACGTTTACGACGTACATGCAGAAGTATCTCGTCAA CACAGCAGGCATGAACACGAAGACTGCCAGCAACGTGATGACGGCTGCGCTCTTCGTGTACATGATCATGCAGCCGGTGT TCGGTGCCTTGTCGGATCGTATCGGCCGCCGCCAGTCTATGCTGCTGTTCGGCTTCTTCGCGACGATCAGCACGGTGCCG CTGCTGCACGCCCTGAAGGACGTGACAAGCCCCGTGATGGCCTTCGTGTTCGTGGTGATCGCGCTGGCCATTGTCAGCTT CTATACGTCGATCAGCGGCCTGATCAAGGCCGAAATGTTCCCACCTGAAGTGCGCGCGCTGGGCGTCGGCCTGTCGTACG CGGTGGCGAATGCGATCTTCGGCGGGTCGGCGGAGTACGTGGCGCTGTGGCTCAAGCAGGCCGGCAGCGAATCGATGTTC TACTGGTACGTGACGGCGCTGTGTGCGATCGCCGGCCTCGTATCGTTCCGCATGCGCGATCCGTCAAAGGAAGGCTATCT GCGCAACGAACCGTGA
Upstream 100 bases:
>100_bases CCCGTTGAAACGCGATCGAAACCGCGTTGAAACCGGGCTGGGGCGCAACACAAAGGCGGCATTCGACCGCTGAAACTTCA AAGAAGGGACCGACACCAGC
Downstream 100 bases:
>100_bases GGCGTCGCGCCTGACGCGCGATCATGAAGTACCGGAAGCGGCTCTTCCATAGAGCCGCTTTTTTTCGCCTGACGCTCGCG CGTGCGCACTCAGGGAAAGC
Product: major facilitator superfamily metabolite/H(+) symporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTDTTVFTPSDTRRRIFAIVGASSGNLVEWFDFYVYSFCALYFAPAFFPKGDTTAQLLNTAGVFAAGFLMRPIGGWFFGR LADKRGRRFAMMVSVFMMCGGSLVIAALPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQ YVTLIGGQLFALLVLVILQQLLTTEELKAWGWRIPFVVGALAALVALYLRRSLDETTTAETRQRKEAGTLRGMWKHKGAF FTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMNTKTASNVMTAALFVYMIMQPVFGALSDRIGRRQSMLLFGFFATISTVP LLHALKDVTSPVMAFVFVVIALAIVSFYTSISGLIKAEMFPPEVRALGVGLSYAVANAIFGGSAEYVALWLKQAGSESMF YWYVTALCAIAGLVSFRMRDPSKEGYLRNEP
Sequences:
>Translated_431_residues MTDTTVFTPSDTRRRIFAIVGASSGNLVEWFDFYVYSFCALYFAPAFFPKGDTTAQLLNTAGVFAAGFLMRPIGGWFFGR LADKRGRRFAMMVSVFMMCGGSLVIAALPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQ YVTLIGGQLFALLVLVILQQLLTTEELKAWGWRIPFVVGALAALVALYLRRSLDETTTAETRQRKEAGTLRGMWKHKGAF FTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMNTKTASNVMTAALFVYMIMQPVFGALSDRIGRRQSMLLFGFFATISTVP LLHALKDVTSPVMAFVFVVIALAIVSFYTSISGLIKAEMFPPEVRALGVGLSYAVANAIFGGSAEYVALWLKQAGSESMF YWYVTALCAIAGLVSFRMRDPSKEGYLRNEP >Mature_430_residues TDTTVFTPSDTRRRIFAIVGASSGNLVEWFDFYVYSFCALYFAPAFFPKGDTTAQLLNTAGVFAAGFLMRPIGGWFFGRL ADKRGRRFAMMVSVFMMCGGSLVIAALPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQY VTLIGGQLFALLVLVILQQLLTTEELKAWGWRIPFVVGALAALVALYLRRSLDETTTAETRQRKEAGTLRGMWKHKGAFF TVLGFTAGGSLIFYTFTTYMQKYLVNTAGMNTKTASNVMTAALFVYMIMQPVFGALSDRIGRRQSMLLFGFFATISTVPL LHALKDVTSPVMAFVFVVIALAIVSFYTSISGLIKAEMFPPEVRALGVGLSYAVANAIFGGSAEYVALWLKQAGSESMFY WYVTALCAIAGLVSFRMRDPSKEGYLRNEP
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=423, Percent_Identity=70.4491725768322, Blast_Score=566, Evalue=1e-163, Organism=Escherichia coli, GI1790550, Length=430, Percent_Identity=29.5348837209302, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1788292, Length=430, Percent_Identity=29.0697674418605, Blast_Score=184, Evalue=7e-48, Organism=Escherichia coli, GI1789941, Length=439, Percent_Identity=32.8018223234624, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI87082231, Length=324, Percent_Identity=27.1604938271605, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87082404, Length=368, Percent_Identity=25.5434782608696, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47234; Mature: 47103
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTTVFTPSDTRRRIFAIVGASSGNLVEWFDFYVYSFCALYFAPAFFPKGDTTAQLLNT CCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AGVFAAGFLMRPIGGWFFGRLADKRGRRFAMMVSVFMMCGGSLVIAALPTYAQIGALAPA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH LLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLFALLVLVILQQ HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLTTEELKAWGWRIPFVVGALAALVALYLRRSLDETTTAETRQRKEAGTLRGMWKHKGAF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCE FTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMNTKTASNVMTAALFVYMIMQPVFGALSDR EEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGRRQSMLLFGFFATISTVPLLHALKDVTSPVMAFVFVVIALAIVSFYTSISGLIKAEMF HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPEVRALGVGLSYAVANAIFGGSAEYVALWLKQAGSESMFYWYVTALCAIAGLVSFRMRD CCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PSKEGYLRNEP CCCCCCCCCCC >Mature Secondary Structure TDTTVFTPSDTRRRIFAIVGASSGNLVEWFDFYVYSFCALYFAPAFFPKGDTTAQLLNT CCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AGVFAAGFLMRPIGGWFFGRLADKRGRRFAMMVSVFMMCGGSLVIAALPTYAQIGALAPA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH LLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLFALLVLVILQQ HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLTTEELKAWGWRIPFVVGALAALVALYLRRSLDETTTAETRQRKEAGTLRGMWKHKGAF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCE FTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMNTKTASNVMTAALFVYMIMQPVFGALSDR EEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGRRQSMLLFGFFATISTVPLLHALKDVTSPVMAFVFVVIALAIVSFYTSISGLIKAEMF HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPEVRALGVGLSYAVANAIFGGSAEYVALWLKQAGSESMFYWYVTALCAIAGLVSFRMRD CCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PSKEGYLRNEP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]